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cn_combo_scaffold_1828_21

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(20995..22743)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037F73CE similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 554.0
  • Bit_score: 1004
  • Evalue 4.90e-290
putative poly-beta-hydroxybutyrate polymerase similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 557.0
  • Bit_score: 845
  • Evalue 1.10e-242
Putative poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:AGU53036.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 557.0
  • Bit_score: 845
  • Evalue 5.30e-242

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1749
ATGCTGCGCAAGGCGAATGGCGCGCGGACCCGCAGACTTCCAGCGCGACACCCGAAGACCCGGGATGCCCTCTCCAAAGGACTTGAAGTGACCCGCCAACACAACGAATTCGACCGCTTGCTCCACGCCGCATGGGGCAGGCTCGGCGGCGGCATGTCGCCGGCGGCGCTGATGCTGGCGTGGTCCGACTGGGCCATCCATTTCGCGACCCAGCCCGGACGCGGCGCCGGCCTGGCGCTGCACCAGGCCCTGCCCGGCGGCCCGCACGCGCACGACCCGCGGCTGGCTGCGGACGACTGGGTTCCGTGGCCCTTCTGCATGTACCGCGAGGCCTTCGAAGCAGGCGGTCGGCGGTTGCTCGAGCTGACCCGCGCGGTTCCCGGCGTGGACCGGCACCACGAAGAGCTGGTCGCCTTCACCGTGCGGCAATGGCTCGAGATGGTCTCGCCCGCCAACTTCCCCGCGACCAACCCGCAGGTGCTGAAGAAGACCGCCGCCAGCGCGGGCATGAACCTGCTCACGGGCGCCGTCCAGGGAATGGAAGACCTGTACCGCGGCGCATCCGGCATGCCGCCGGTCGACGCCGATGCCTTCAGGCCGGGGTACGAGGTGGCGCTCACGCCGGGCAAGGTCATCCTGCGCAACGAGCTCGTCGAGCTCATCCAGTACGCGCCGGCAACACCGACGGTACATGCCGAGCCGCTGCTGCTCCTCAGCGCCTGGATCATGAAGTACTACGTGCTGGACCTCTCCCCGCACAACTCGCTGATCCGCTACCTGGTCGGCCAGGGCCACACGGTGTTCGCCGTCTCCTGGAAGAACCCGGGCGCTTCCGGCGCCGGGCTCGGCATGGACGACTACCTGCGCCTGGGCATCCGCGCCAGCCTCGACGCCGTCGAGACCGTGCTGCCCGGGCACCGCGTGCACGCGGTCGGATACTGTCTCGGCGGCACGCTGATGGCCATCGCGGCGGCGGCGATGGCGCGCGACCGGGACGACCGCCTTGCCTCGCTCTCGCTGCTGGCCGCGCAGACCGACTTCACTGAGCCCGGTGAGATCGGCCTGTTCATCGACGAAAGCCAGCTCGCCTTCCTCGAGGACATCATGGCGCACCAGGGATTCCTCGGCGCGACACAGATGGCGGCGGCCTTCCAGTCGTTGCGCCCCGGCGAGCTGGTCTGGGCACCGCTGGTGCGGAGCTGGCTGCTCGGCGAACGCCCTGCCCTGAACGACCTGATGGCGTGGAACGCGGACGGCACGCGCATGCCCTATCGCATGCATGCCGACTACCTGCGCAGCCTCTTCCTCGACAACGCACTGGCCGAGGGCCATTACCTCGTCGACGGGCGGCCGGTGTCGCTGGGCGACATCGACGTCCCGGTGTTCCTGCTCGGTACCCGGACAGACCACGTGGCGCCCTGGCGGTCCGTCTACAAGTTCAACCTGCTGTGCGACTCGGACGTGAGCTTCGTGCTGACCGAGGGCGGCCACAACGCCGGCATCGTGAGCGAGCCCGGGCACCCGCATCGCAGCTACCGCATCCTGCGGCGGCGCAGGCACGATGCGTACGTCGCGCCCGACGAGTTCCTCGAGCTTTCGCGGGAGGTCGAGGGGTCATGGTGGCCCGGTTTCCAGCAATGGCTTGCCGCGCATTCGGGGCCGAAGCGCCGCCCGCCCCCGATGGGGGCGCCGCGACGCGGCCTGCCCCCGCTTTGCAGCGCGCCCGGCACCTATGTGCTGATGCGCTGA
PROTEIN sequence
Length: 583
MLRKANGARTRRLPARHPKTRDALSKGLEVTRQHNEFDRLLHAAWGRLGGGMSPAALMLAWSDWAIHFATQPGRGAGLALHQALPGGPHAHDPRLAADDWVPWPFCMYREAFEAGGRRLLELTRAVPGVDRHHEELVAFTVRQWLEMVSPANFPATNPQVLKKTAASAGMNLLTGAVQGMEDLYRGASGMPPVDADAFRPGYEVALTPGKVILRNELVELIQYAPATPTVHAEPLLLLSAWIMKYYVLDLSPHNSLIRYLVGQGHTVFAVSWKNPGASGAGLGMDDYLRLGIRASLDAVETVLPGHRVHAVGYCLGGTLMAIAAAAMARDRDDRLASLSLLAAQTDFTEPGEIGLFIDESQLAFLEDIMAHQGFLGATQMAAAFQSLRPGELVWAPLVRSWLLGERPALNDLMAWNADGTRMPYRMHADYLRSLFLDNALAEGHYLVDGRPVSLGDIDVPVFLLGTRTDHVAPWRSVYKFNLLCDSDVSFVLTEGGHNAGIVSEPGHPHRSYRILRRRRHDAYVAPDEFLELSREVEGSWWPGFQQWLAAHSGPKRRPPPMGAPRRGLPPLCSAPGTYVLMR*