ggKbase home page

cn_combo_scaffold_1828_23

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(23306..23680)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000374BA7D similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 124.0
  • Bit_score: 227
  • Evalue 8.00e-57
DnaK suppressor protein {ECO:0000313|EMBL:EJL80396.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313. similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 124.0
  • Bit_score: 204
  • Evalue 1.00e-49
putative transcriptional regulator, TraR/DksA family similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 124.0
  • Bit_score: 148
  • Evalue 1.30e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGAAACATCTCGATGAAACCGACCGCCGCTCCCTTCATCGGCAGCTGGAGTCGATGAAGCGGCAGGTTCTGGACGAACTCCGCGATTCGGCTCCCACGGCCGAACTCCTGTCCGCCGACGGCGGCCGCGAGGTGACGACCCATGCCGACGAAGCCGAGGCGGAGCGCGTCGCCGACGTGCATCTGGCCGAGATCGAGATCGACCGCACCAGGCTCGAGGAGATCGAACTGGCGCTCGCGCGCCTGTCGGACGGCCGCTACGGCATCTGCGAAGACTGCCGCGCCGAGATCCCGCGCGCGCGGCTGCTCGCTCAGCCCACGGCCATCCGGTGCGCGGCCTGCCAGTCGGCGATCGAGGCGCACCGGCGCCACTGA
PROTEIN sequence
Length: 125
MKHLDETDRRSLHRQLESMKRQVLDELRDSAPTAELLSADGGREVTTHADEAEAERVADVHLAEIEIDRTRLEEIELALARLSDGRYGICEDCRAEIPRARLLAQPTAIRCAACQSAIEAHRRH*