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cn_combo_scaffold_1828_27

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 26405..27844

Top 3 Functional Annotations

Value Algorithm Source
peptidase n=1 Tax=Variovorax paradoxus RepID=UPI000362F60B similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 481.0
  • Bit_score: 754
  • Evalue 5.50e-215
Trypsin-like serine protease with C-terminal PDZ domain containing protein {ECO:0000313|EMBL:EJL80392.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 480.0
  • Bit_score: 663
  • Evalue 3.10e-187
peptidase S1C, Do similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 447.0
  • Bit_score: 322
  • Evalue 2.00e-85

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGAAGGCCGCTGCCCTCGCGCGATGCCTGGCCGCGATCGCCTTCGGTGCATTCGCGCTCGCGAGCGCGACGCAGGCCTGGTCGCAGGCGCGGTCATGCCTGGAGCGGGCGCCGTCCGTGCCGCAGGCCGCCGATTTCGCGGCCGCCGCCGCGCGGCAATCACCCGCGGTGGTGAGCATCATGGTCACCGAGAACGGCGGCGAACGGCCCGTTGCCGGCGACATGCGGCCCTCCATGCCGTGGGAGAAAGCCTGGGGGCGTGGCTTCGCGTCGGGGTTCATCATCGGCAACGACGGATACATCCTGACCAGCGCCCATGCAGTGACGGGTGTCCAGGCCATCTCAGTCGTCACGGCCGACCAGCGGCGCTTCGATGGCGAAGTCGTGGGTATCGATCGCCTCAGCGATGTCGCGCTGCTGAAGGTCCCGGCGTCCGGCCTGCCGGTCGTCGTCCTGGGCCATGGCAGCGACCTGTGTCCCGGCGAGCGGGTTGCCGCGATGGGGGCTCCGTTCGGCTTCGAGCGCAGCGTGACCGCCGGCGTGGTGAGCGCCAATCCACGCTACATCCCCGGGGGAAGCGGCGTGCCGTTGATACAGAGCGACGTGGCGCTCAACCCGGGCAACTCGGGCGGCCCGCTGTTCAACGAACGAGGCGAAGTGGTGGGCATGAACTCGATGATCTATTCCCCGGGTGGCGGCTACTTCGGCATGTCGTTCAGCCTGCCCATCGATACGGTGATGCGTGTGGTGGATGAGCTTCGCGCGACCGGGCACGTGCGGCGCGGGCACATCGGTGCCCGCACCCAACCCCTGACTGCCGAGCTGGCGCCGGCATTCGGCCTTGCTTCCACGCAAGGAGCGCTGATCGTACGTGTCGATCCGGACAGCCCGGCCGCGGCGGCGGGGCTTCGCAGCGGCGATGTGGTGCTGGCCGTCGGTGCCGACACGGCGATGAGCTATGCCGACATACAGAACCGCGTGGCCGCAGCTCACCAGGGCAGCCGGATCGAGCTGAAAGTCTGGCGGCACAGGGCGCCGTTGACGGTGCAGGTGGGAGTGGTCGAGAACCCGCCGGATGCCTCGCCCCGTCCGGCTGCACGCGCTGTCGTGCAGGAAGCGCGCTTCGGATTGGAGCTCGTCGAGCGCAAGGGCGTGTTGGGCATCAGCCTGCCGTCCCCAGGGTTGTATGTGCAATCGGTCTCCGGTTCGGCCCAGATGGTAGGGCTGCGGTACGGCGACATGCTGATTGCGGTCAACGACGTGGAAGTGGCCTGCTTGGCAGACTTCGACGCGGCGATCCGGTCCGTCACGGAGAACGACACGGTTGCGCTGCTCGTCATGCGCGGCTCGGCGCGAAGCTATGTACCCATCCTCCCGCGCAGTGCTCAGCGCACTCCGGTCGAGCGGCGCGCAGGCGAGGTGGCCGGGTCTATGCCCTGA
PROTEIN sequence
Length: 480
MKAAALARCLAAIAFGAFALASATQAWSQARSCLERAPSVPQAADFAAAAARQSPAVVSIMVTENGGERPVAGDMRPSMPWEKAWGRGFASGFIIGNDGYILTSAHAVTGVQAISVVTADQRRFDGEVVGIDRLSDVALLKVPASGLPVVVLGHGSDLCPGERVAAMGAPFGFERSVTAGVVSANPRYIPGGSGVPLIQSDVALNPGNSGGPLFNERGEVVGMNSMIYSPGGGYFGMSFSLPIDTVMRVVDELRATGHVRRGHIGARTQPLTAELAPAFGLASTQGALIVRVDPDSPAAAAGLRSGDVVLAVGADTAMSYADIQNRVAAAHQGSRIELKVWRHRAPLTVQVGVVENPPDASPRPAARAVVQEARFGLELVERKGVLGISLPSPGLYVQSVSGSAQMVGLRYGDMLIAVNDVEVACLADFDAAIRSVTENDTVALLVMRGSARSYVPILPRSAQRTPVERRAGEVAGSMP*