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cn_combo_scaffold_1828_30

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 28580..28885

Top 3 Functional Annotations

Value Algorithm Source
iron permease n=1 Tax=Variovorax paradoxus RepID=UPI00037BBF15 similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 101.0
  • Bit_score: 186
  • Evalue 1.30e-44
High-potential iron-sulfur protein {ECO:0000256|RuleBase:RU000620}; Short=HiPIP {ECO:0000256|RuleBase:RU000620};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 93.0
  • Bit_score: 168
  • Evalue 6.50e-39
hip; high potential iron-sulfur protein, HiPIP similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 99.0
  • Bit_score: 116
  • Evalue 4.50e-24

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGAAATCCAGCCGCCGCATCTTCATGCTGACCCTTGCCGCGACGGGGGCCAGCGCCTGCGTCACGCGCTCGTTCGCGCAGGCCCGTCTCGACGAAAAGGACCCGCAGGCCGCTGCCCTGGGGTATGTCGCCGATTCGGCGAAGGCCGACGCGAAGAAGTTCCCCAAGCATGACAACGCCCAGCTGTGCAATGGCTGCGCGCTCTGGCAGTCCAAGCCGATGGAAGTGCAGGGCAACTGCGCGCTATTTGCGGGAAAGCAGGTCAATGCCAAAGGCTGGTGTAGTGCCTGGGCCAAGAAGGCTTAG
PROTEIN sequence
Length: 102
MKSSRRIFMLTLAATGASACVTRSFAQARLDEKDPQAAALGYVADSAKADAKKFPKHDNAQLCNGCALWQSKPMEVQGNCALFAGKQVNAKGWCSAWAKKA*