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cn_combo_scaffold_10_6

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(4226..5530)

Top 3 Functional Annotations

Value Algorithm Source
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1M2_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 433.0
  • Bit_score: 807
  • Evalue 6.50e-231
extradiol ring-cleavage dioxygenase class iii protein subunit b similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 433.0
  • Bit_score: 805
  • Evalue 5.30e-231
Extradiol ring-cleavage dioxygenase class III protein subunit B {ECO:0000313|EMBL:ADU36778.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 433.0
  • Bit_score: 805
  • Evalue 2.70e-230

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
GTGGCTCGCATCATCGGCGCCGTCGCCTGCTCGCACACGCCCACCATCGGCTTCGCGTTCGACAAGAACAAGCAGCAGGACCCGGTCTGGGCGCCCATCTTCGAGGCCTTCGCGCCGGTGCAGCAGTGGCTGGCCGACAAGAAGCCCGATGTGCTGTTCTTCATCTACAACGACCACGTCAGTTCCTTCTTCTTCGACCACTACTCGGCCTTCACCCTCGGCGTGGGTGAACGGCACGAGGTGGCCGACGAAGGCGGCGGCGCGCGCGACCTGCCGCCGCTGGCGGGCCATCCGGCGCTGGCGCGGCACATCGGCCGCTCGCTGGTGGCGGACGAGTTCGACATGTCCTTCTTCCAGGACCGCGCGCTGGACCACGGCGTGTTCTCGCCGATGTCACTGCTGTGCCCGCACGAGCCGGCATGGCCGATTCCCGTGGTGCCGCTGCAGGTGGGCGTGCTGCAGTCGCCGGTGCCTTCGGCGCGCCGCTGCTACAGGCTCGGCCAGGCGCTGCGCCGCGCGATCGAGAGCTACCCGGAGGACATCGGCGTGGCGATCGTCGCCACCGGCGGCCTCTCGCATCAGGTGCACGGCGAACGCGCGGGCTTCAACAACACCGCATGGGACGCGCAGTTCCTCGACCTGATCGAGAACGACCCCGTGCGGCTGACCGAGATGACGCAGGCCGAACTGGCCACGCTCGGCGGCATGGAAGGTGCCGAGGTCATCATGTGGCTGGTGATGCGCGGCGCCCTGTCGGCGAATGTTCGCAAGACGCACCAGAGCTACTACCTGCCCTCGATGACCGGCATTGCCACGGCCATCTACGAGAACCTGGCGAGCCCGCCCATTGCCGGCGAGGTCGAGCGGCACCGCCGCCACGTCGAGCAGGAGCTGGCCGGCGTGGAAGCACTGCGCGGCACTTATCCGTTCACGCTGGAGACCAGCGTGCGAGCCTATCGCCTCAACAAGTTCCTGCACGGCATGACGCGCCCGGCGCATCGCGCAGCCTTCCTGGCCAATGAGGAGGCCGCATTCGAGGCCGCGGCGCTGACCGAAAAGGAACGCGAGATGGTGCGCCAGCGCGACTGGCGCGGCCTGATCCAGTACGGCGTGATCTTCTTCATGCTGGAGAAGCTGGGCGCGGTGGTAGGCGTGTCGAACCTGCACATCTATGCCGCCATGCGCGGCCAGTCGCTGGAAGATTTCCAGCAGACCCGCAACGCGCCCGGCGCGCTCTATTCGGTGGCCGGCAAGGACGCGGCACCGCAGGCCTGGGACAACGCGACCGCGCCCGACCGGCGCTGA
PROTEIN sequence
Length: 435
VARIIGAVACSHTPTIGFAFDKNKQQDPVWAPIFEAFAPVQQWLADKKPDVLFFIYNDHVSSFFFDHYSAFTLGVGERHEVADEGGGARDLPPLAGHPALARHIGRSLVADEFDMSFFQDRALDHGVFSPMSLLCPHEPAWPIPVVPLQVGVLQSPVPSARRCYRLGQALRRAIESYPEDIGVAIVATGGLSHQVHGERAGFNNTAWDAQFLDLIENDPVRLTEMTQAELATLGGMEGAEVIMWLVMRGALSANVRKTHQSYYLPSMTGIATAIYENLASPPIAGEVERHRRHVEQELAGVEALRGTYPFTLETSVRAYRLNKFLHGMTRPAHRAAFLANEEAAFEAAALTEKEREMVRQRDWRGLIQYGVIFFMLEKLGAVVGVSNLHIYAAMRGQSLEDFQQTRNAPGALYSVAGKDAAPQAWDNATAPDRR*