ggKbase home page

cn_combo_scaffold_10_9

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 7444..8721

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XIJ5_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 426.0
  • Bit_score: 651
  • Evalue 5.80e-184
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 426.0
  • Bit_score: 651
  • Evalue 1.60e-184
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU52707.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 426.0
  • Bit_score: 651
  • Evalue 8.20e-184

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGACCAAGCAAATCGAACATCACAAAGTTATCGGCCATGCCGACAGCGTGGCGCTTGGCATCAACTTGCGGCACCTGCGGGCGTTCTCGGCCGTGGCCGCGGCGGGGAGCGTCGCGGCGGCCGCGGACGCGCTGTACCGGGTGGCGTCCGCGGTGACGCGCTCGGTGCTGGACCTGGAAGCCGCGCTCGGCCGCCCGCTGTTCGACCGGCGCGCACGGGGCATGGCGCTCAACGCCTACGGAGAGCTGGTGCTGGTGCGCGCGTTGCGCATCGAGCGCGAGTTCGAAGAAGCGCGCACGCAGCTCGTGGCGCGCGGCGGAATGGACGGCGGCGCCGATGTCCATTCGCTCTTCACCTCGATCCTGAACGGCCGTCGTCTTGCCGTGGTCGCGAGCCTCGCGCAGAAGCGCAACATGCCCGCCGTGGCACGCGAGTTCGGCATCACGCAGCCGGCCATCAGCAGCGCGCTCAAGGACCTGGAAAGCGGGCTGGGCGTCGCGCTCTTCACGCGAACGGCACGAGGCTTGTCGCCGACGCCGGCCGGCGAGATCGTCGCCTTCTATTTCAAGCGGGTGCTGTCGGAGCTGAGGCACATCGGCCCCGACATCGCCGCCAGCGAAGGCAGCCTGCAGGGCAGCGTGACCGTGGGCGCGCTGCCGCTCGGGCGCACGCAGATCCTGCCGCTGGCGATTGCCTCCTTGCTGGCGCGGCATCCGCAGTTGCATGTTTCCACGGTGGAGAGTCCTTACGACGCGCTGGCGGCGTCGCTGCGCAGCGGCGACATCGACTTCATTCTCGGCGCACTGCGCAACAACGCCGGCGAGGTCAAAGACCTGCAGCAGCAGGCGCTGTTCGAAGACCGCATCTCGGTGATCGCGCGCGCCGGGCATCCGCTCGCGCGCGCGGAGCGCATCGATTTCAGGATGCTGCGCGAGGCGCGCTGGACACTTTCACGGCAGGGCTCGCCTTCGCGCGAGCTGCTGGAGCGCTTCTTCTCGAATGCCCGGCAGGCGCCGCCGCTGCCGGCAGTGGAGACCGGCGATCTCGCCGTGCTTCGCGGGCTGCTGCTGGAAAGCGACATGCTCACCGCGATCTCGGCGCACCAGTTGCGCTACGAAATCCGCGACGGCAGCTTGGTGGTGCTGGACTTTCCGCTGGAGGAAACGCGGCGCGAGATCGGCCTGACGCAACGCCTGGGCGCCTTTCCTTCACCAGGGGCGCGTGCCTTGATGGAAGAGATCGGCAAGGTGGTGGCGGGGTCCGCGGACTTCCGCTGA
PROTEIN sequence
Length: 426
MTKQIEHHKVIGHADSVALGINLRHLRAFSAVAAAGSVAAAADALYRVASAVTRSVLDLEAALGRPLFDRRARGMALNAYGELVLVRALRIEREFEEARTQLVARGGMDGGADVHSLFTSILNGRRLAVVASLAQKRNMPAVAREFGITQPAISSALKDLESGLGVALFTRTARGLSPTPAGEIVAFYFKRVLSELRHIGPDIAASEGSLQGSVTVGALPLGRTQILPLAIASLLARHPQLHVSTVESPYDALAASLRSGDIDFILGALRNNAGEVKDLQQQALFEDRISVIARAGHPLARAERIDFRMLREARWTLSRQGSPSRELLERFFSNARQAPPLPAVETGDLAVLRGLLLESDMLTAISAHQLRYEIRDGSLVVLDFPLEETRREIGLTQRLGAFPSPGARALMEEIGKVVAGSADFR*