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cn_combo_scaffold_10_12

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(9686..11329)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00036285D7 similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 534.0
  • Bit_score: 842
  • Evalue 3.00e-241
Membrane protein {ECO:0000313|EMBL:KJA11253.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 521.0
  • Bit_score: 719
  • Evalue 3.20e-204
putative methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 534.0
  • Bit_score: 681
  • Evalue 1.50e-193

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1644
ATGTTCCTGAGCAACGTCTCAATTGGCAAACGCCTGGCCATCGTGCTGGGCCTCATCCTGGCGCTATTTCTCGCCACCAGCGTCGCCGCGGTATTCAAGCTGCGCCAATTGAGCGTCGAGATCGACACGATGATCGAGGACAACGTGAAGACCGAGCGCGCGGGCGCCGACTGGCTGCGCCATACCACCGCGGGCGTCCAGCGCGCGGCGGCCATCGCCAAGAGCAGCGACTCGAGCCTGATCGACTACTTCGCGCCGGCAACGGCCGCCTCGATCAAGGACACCAACGAGCTGCAGAAATTCATCGAGGGCAAGCTGGTCAAGCCCGAGGAAAAGCAATTGCTCGAGAAGGTCGCAACGCTGCGCAAGGGCTACCTCGCATCGCGCGAGGAAGTGAGCAAGGCCAAGGTCAGCGGCGACCTGGCGGGCGCCAACCGGCTCTTCGACTCGCAGTTCCAGCCCACGTCGACCAGCTACATCGCCGGCGTGCAGCAGGTCGTGAACCTGCAGCGCGAGCAGCTCGACGCCGCCGCGGCGCGCGCCAACAACCTGCGCGCGCAGACCAGCACGCTGCTGATCGTGTGCTCCACGGTGAGCCTGGTGCTGGGCGCGCTGCTGGCCTGGTTCCTGGCGCGCAGCATCACCCGCCCGCTGCACAACGCCGAGACCATCGCCCAGGCAATCGCCGACATGGACCTCACCGGCAAGCCCCAGCACAGCTACGCCAACGACGAAACCGGCCACCTGCTGCGCGCCCTGGACCTGATGCGCACTGCCCTGCAAGGCTCGCTGACGCAGGTGCACGGCGTGGTGATGAACGTGTCGACCGCCAGCACGCAGATCGCCACCGGCAACCAGGACCTGTCGTCGCGCACCGAGGAACAAGCCAGCTCGCTGGAGGAAACCGCTGCGTCCATCGAGGAACTGACCTCGACCGTCAAGCAGAACGCCGACAACGCGCGCCAGGCCAACCAGCTCGCCACCTCGGCCTCGGAAGTGGCCGTGCGCGGCGGCAGCGTCGTGTTCCAGGTCGTGGAGACCATGGGCTCGATCAATGCGTCGTCCAAGAAGATCGTCGACATCATCAGCGTGATCGACGGCATCGCCTTCCAGACCAACATCCTGGCGCTGAACGCGGCGGTGGAAGCGGCCCGCGCGGGCGACCAGGGACGCGGCTTCGCGGTGGTGGCCTCGGAGGTGCGCAACCTGGCGCAGCGCTCGGCCGCGGCGGCCAAGGAAATCAAGACGCTGATCGGCAATTCGGTCGAGAAGGTCGAGGAAGGCAGCCGCCAGGTGGCCGATGCCGGCCGCACCATGGACGAGATCGTCGGCAGCGTGAAGCGCGTGACCGACATCATGGGCGAGATCAGCGCGGCGAGCCAGGAGCAGACATCGGGCATCGAGCAGATCAACCAGGCCATCACGCAGATGGACCAGGCCACGCAACAGAATGCGGCGCTGGTCGAGGAAGCCTCGGCGGCGGCGCAATCGCTGCAGGAACAGGCGGGCAGCCTCGCGCAGATCGTCGGGCAGTTCAAGCTGGAACACGGCCACGGCGCGCCTGCGGCGGCCCACGGCCTTCGCGCGATTGCCGGCCAGAAGGCATCGCGCGGGCTGGCGATGCCGGAACTGGGGTTCCAGTAA
PROTEIN sequence
Length: 548
MFLSNVSIGKRLAIVLGLILALFLATSVAAVFKLRQLSVEIDTMIEDNVKTERAGADWLRHTTAGVQRAAAIAKSSDSSLIDYFAPATAASIKDTNELQKFIEGKLVKPEEKQLLEKVATLRKGYLASREEVSKAKVSGDLAGANRLFDSQFQPTSTSYIAGVQQVVNLQREQLDAAAARANNLRAQTSTLLIVCSTVSLVLGALLAWFLARSITRPLHNAETIAQAIADMDLTGKPQHSYANDETGHLLRALDLMRTALQGSLTQVHGVVMNVSTASTQIATGNQDLSSRTEEQASSLEETAASIEELTSTVKQNADNARQANQLATSASEVAVRGGSVVFQVVETMGSINASSKKIVDIISVIDGIAFQTNILALNAAVEAARAGDQGRGFAVVASEVRNLAQRSAAAAKEIKTLIGNSVEKVEEGSRQVADAGRTMDEIVGSVKRVTDIMGEISAASQEQTSGIEQINQAITQMDQATQQNAALVEEASAAAQSLQEQAGSLAQIVGQFKLEHGHGAPAAAHGLRAIAGQKASRGLAMPELGFQ*