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cn_combo_scaffold_10_15

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 14505..15332

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003756AF3 similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 274.0
  • Bit_score: 444
  • Evalue 7.00e-122
signal transduction protein similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 275.0
  • Bit_score: 362
  • Evalue 1.30e-97
Putative signal transduction protein {ECO:0000313|EMBL:ACS20197.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 275.0
  • Bit_score: 362
  • Evalue 6.40e-97

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGACACTCGACGAACTCTTTGCCAATGACGAGTCGCTCCCTACCGTTCCCAGGGTGGTGTCCGACCTCATAGAGATGCTGCGCGACGACGACGTGCCCTTCGCGGCCATCGCCCACCGCATCGAGCTCGACCAGGTGCTTGCGGCCAAGGTGCTGCAGATGGTCAATTCGCCGTTCTTCGGGCTGCCGCGCAAGGTCTCGTCCATCCAGGGCGCGATCCTGATGCTCGGGCTCTCGGCCATCCGGTCGTTCGTGGTGAGCTCGGGCCTGTCGGGTTCGTTCCGGAAGGTGGAGGGCGTCAAGTTGCCGGAGTTCTGGGCCCACAGCCTGCGCGTGGCTTCGGTCTCCAGGTATCTGGCTTCCAAGACCCGGCGCGTCGATCCCAACCTGGCTTTCACCGCGGGCAGCATGCATGCCATCGGTCACCTGATCATGGCGCAGGCCATGCCGGAGCGCATGGCTTCATTGAACGCCACCCATCCCTTCGACGCACTGGGCCGTGCGCAGCTCGAGCTGGTCGAGTTCGGCTACCACTACGGCGACGTGAGCGCCTCGCTGGCGCGCCGCTGGGAATTCGCTCCCGAACTGGTCAACGCGCTTTCCAGCTTCGTGACCCAGGCCAAGGCGGAGCGCCCCGATGCGCTCGGCGGCATTCTTCACATGGCCGTGTGGCGCGTGGCGCTGGAGCGCCAGGGCGTGGACCTGAGCAACCTCGGCGCCCTCTGGCCCACCCAGTCGGCGATGGCCATCGGCATCACCGAGGACATCGTGCAGGGCATGCCGGCACCGCGCGTGCTGGCCGCGGACCTGGAGTCGATGATCGCCTGA
PROTEIN sequence
Length: 276
MTLDELFANDESLPTVPRVVSDLIEMLRDDDVPFAAIAHRIELDQVLAAKVLQMVNSPFFGLPRKVSSIQGAILMLGLSAIRSFVVSSGLSGSFRKVEGVKLPEFWAHSLRVASVSRYLASKTRRVDPNLAFTAGSMHAIGHLIMAQAMPERMASLNATHPFDALGRAQLELVEFGYHYGDVSASLARRWEFAPELVNALSSFVTQAKAERPDALGGILHMAVWRVALERQGVDLSNLGALWPTQSAMAIGITEDIVQGMPAPRVLAADLESMIA*