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cn_combo_scaffold_10_21

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(21290..21919)

Top 3 Functional Annotations

Value Algorithm Source
Putative threonine efflux protein n=1 Tax=Acidovorax sp. CF316 RepID=J0UA16_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 208.0
  • Bit_score: 298
  • Evalue 6.20e-78
Putative threonine efflux protein {ECO:0000313|EMBL:EJE53002.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 208.0
  • Bit_score: 298
  • Evalue 8.70e-78
amino acid transporter LysE similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 208.0
  • Bit_score: 274
  • Evalue 2.70e-71

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGTTCCCCCAAGACGTTCTGCTCGCCTACATCGCGGCCTGCCTGGTGGTCGTGATGGCCCCCGGACCCGACAACATCCTGGCCATCAGCCGCGGCCTGAGCCAGGGCAAGGCGGCGGCAGCGCTGTCTTCCGTCGGCGCGGGGCTGGGCATCATGTTCCACACCGCGGCGGCGGCGCTGGGCCTGTCGCTGGTGATCCAGGCATCGCCCGTGGCGTTCTGGGCCGTGAAGGCGGTCGGCGGGCTGTATCTGCTGTGGCTGGGCTACAAGGCGCTGTCGTCGCGCAACCTGGTGTCGTTCGAGCCGGGTGCCCACCAGCCGCTGCGCAAGGTGTTCCTCACGGGGCTGCTGTCGAACGTGCTGAACCCGAAGCCGGGGCTGTTCGTGCTGGCCTTCCTGCCGCAGTTCGTGAGCGCGGCTCGCGGGCCGGTGGCGCTGCAGATGCTGGTGTACGGCGCGATCTTCGCGGTGCTGACCGCGCTGATCTTCACCGTGCTGGGCTGCTTCGCGTTCCGGCTGTCGTCGTGGCTGCGGCGGCATCCGCGCGTGGGCACCGGCCTGAACGTGGGGGCCGGCCTCACTTTCATCGCGGCGGGGCTGTCGGTGCTCGCGTTGCGACAGCGGACCTGA
PROTEIN sequence
Length: 210
MFPQDVLLAYIAACLVVVMAPGPDNILAISRGLSQGKAAAALSSVGAGLGIMFHTAAAALGLSLVIQASPVAFWAVKAVGGLYLLWLGYKALSSRNLVSFEPGAHQPLRKVFLTGLLSNVLNPKPGLFVLAFLPQFVSAARGPVALQMLVYGAIFAVLTALIFTVLGCFAFRLSSWLRRHPRVGTGLNVGAGLTFIAAGLSVLALRQRT*