ggKbase home page

cn_combo_scaffold_10_27

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 31660..32442

Top 3 Functional Annotations

Value Algorithm Source
Conserved TM helix repeat-containing protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6Y9_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 262.0
  • Bit_score: 428
  • Evalue 6.40e-117
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 262.0
  • Bit_score: 428
  • Evalue 1.80e-117
Conserved TM helix repeat-containing protein {ECO:0000313|EMBL:ADU37193.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="V similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 262.0
  • Bit_score: 428
  • Evalue 9.00e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGGAAAACTTCGGCATTCACCTGGAGCCGCTGCGCGCCATCCTCTATCAGGTGGGGGCGTTCATTCCGCGCCTGCTGGTGGCGCTGGTGGTGGTGTTCGTGGGCTGGCTCATCGCCAAGGCGGCGCGCTTTGCCGTGACCAAGGCCTTGCGCGCCATCAACTTCAACGTGCTGACCGAGCGCGCGGGGCTCGACAACTTTCTGCGCCAGGGCGGGCTGGCGGGCGACACCAGCAGCCTGTTCGGCATCCTGGCGTATTGGCTGGTGATATTGGCCTCCCTGCTCATCGCCTTCAACGGCATGGGGCTGAGCTACATCGCCGATCTGCTGGGGCGCATCGTCTGGTTCGTGCCCAACGTGTTCGTCGCCTTGCTGGTGCTGGCCTTCGGCTCGTACTTCGCCAAGTTCGTGGGCGACGCGGTGGGCAGCTATTTCCGCGGCGTGAAGATGCAGGACGCCATGCTGTTCGCCAAGGTGGCGCAGTACGCGGTGATGGCTTTCGTGATCCTCATCGCTCTGGACCAGATCAAGGTGGGCGGCGACATTGTGCGCGAGAGCTTCCTGGTGATCCTGGCGGGCGTGGTTTTTGCGTTGGCCCTGGCATTCGGGCTGGCCGGCAAGGATTGGGCAAAGGCGCAGATCGAGCGCTGGTGGCCCCGGCAGCAGCAACTGACGAAGACGACGGGCACCGGCAGGGAAGGGCCGGGCGCGGCCCCGACGCCGATCAACCCGAACACGAATACGGCCGCGCCGCCGCGTTTCGACGACCGTCCGCCCCGCTGA
PROTEIN sequence
Length: 261
MENFGIHLEPLRAILYQVGAFIPRLLVALVVVFVGWLIAKAARFAVTKALRAINFNVLTERAGLDNFLRQGGLAGDTSSLFGILAYWLVILASLLIAFNGMGLSYIADLLGRIVWFVPNVFVALLVLAFGSYFAKFVGDAVGSYFRGVKMQDAMLFAKVAQYAVMAFVILIALDQIKVGGDIVRESFLVILAGVVFALALAFGLAGKDWAKAQIERWWPRQQQLTKTTGTGREGPGAAPTPINPNTNTAAPPRFDDRPPR*