ggKbase home page

cn_combo_scaffold_11830_5

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 4153..5046

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003471CDF similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 284.0
  • Bit_score: 433
  • Evalue 1.70e-118
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 293.0
  • Bit_score: 425
  • Evalue 5.10e-116
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 297.0
  • Bit_score: 411
  • Evalue 1.50e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_61_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGACCTGGTCCCGTCGTTTTCTCCCGTCGATGGCTCTCCTGCGCGCGCTGGAAGCCTCCGCGCGCCTGCAGAGCTTCACGGCCGCCGCTGCCGAACTGAACCTTACGCAGAGCGCGGTCAGTCGGCAGATCCGCGCGCTGGAAGAACTGCTGGGCGGCGATCTCTTCGTGCGCGAGCGCCATGCCGTGCGGCTCACGCAGGCGGGTGAAGCCTATGCACAGGAGGTGCGCGAGGCGCTGGGGCGCATATCGACTGCGACTCTCGGCTTTCGCGCCAATCCTTCGGGCGGCACGCTGAACCTCGCCATCCTGCCGACCTTCGGCACGCGCTGGCTGGCGCCGCGCCTGCCCGACTTCGTCGCCGAGCATCCGGGCATCACGATCAACCTCGTGACGCGGCTCGCACCCTTCGACTTCCGCATGGAGCAGATCGACGCGGCCGTGCACTTCGGCCAGCCCGATTGGCTGGGCGCCGAGCTCGATTTCCTGATGAGCGAAACGGTGGTTCCCGCCTGCAGCCGCAAGCTGCGCGAGTTGCATGGCTTCGAGACGCCGACCGATCTGCTGAAGGCGCCGCTGCTGCACCTGGTGTCCCGGCCCCAGGCGTGGAAGCAATGGTTCGCGGCCATGCGGACATCGGTGGACCAGGTGCCGGGCATGCTCGTCGATCAGTTCGCGATGGCCGCACAGGCTGCGATGGCAGGGCTCGGCATCGCGCTGCTGCCGAAGTTCCTCATCGAGCAGGAGCTGGCGCGCGGCGACCTCGTCGAGGCGCTCGACGGGCCGGTGCAAAGCGCTGACAGCTACTACCTCGCCTGGCCTTCGGGCCGTGGCGACTATCCGCCGCTGCGGAGCTTTCGACGCTGGATCGGCGCCGCGGCATCGGCTTTCTGA
PROTEIN sequence
Length: 298
MTWSRRFLPSMALLRALEASARLQSFTAAAAELNLTQSAVSRQIRALEELLGGDLFVRERHAVRLTQAGEAYAQEVREALGRISTATLGFRANPSGGTLNLAILPTFGTRWLAPRLPDFVAEHPGITINLVTRLAPFDFRMEQIDAAVHFGQPDWLGAELDFLMSETVVPACSRKLRELHGFETPTDLLKAPLLHLVSRPQAWKQWFAAMRTSVDQVPGMLVDQFAMAAQAAMAGLGIALLPKFLIEQELARGDLVEALDGPVQSADSYYLAWPSGRGDYPPLRSFRRWIGAAASAF*