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cn_combo_scaffold_12639_2

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 368..1927

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003612853 similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 515.0
  • Bit_score: 817
  • Evalue 9.80e-234
methyl-accepting chemotaxis sensory transducer similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 513.0
  • Bit_score: 644
  • Evalue 1.90e-182
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACS20802.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Va similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 513.0
  • Bit_score: 644
  • Evalue 9.40e-182

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
ATGAAGAATTGGAATACGAGCCAGCGCCTGGGCGCCGGCTTCGCGGTCGTGCTCGCGCTGGTGGTGCTGATCGCCGGCGTCGGTGTGCTGCGGCTGCAGGCGGTGGGCGAAGCCACCAAGGACATGGCCCGGCAGTCGCTGGTGAAGGAACGCCTGGCTTCGGCCTGGCAACTGGGCACCACCACCAACAGCGTGCGCACCGTCTCGCTGCTCAAGAGCAACGACGCCGCGGTGCAGGACTACCTGCAAAAGAGCATCGCCGGCACCAGCGCCAGCATCTCCGAAACGCAGAAGAAGCTCGAGGATATGCTGGCGGCTCCCGCCGAACTGGCGCTGAGCGCCGACATCAGGAAGAAGCGCGGCGACTATGTCGAGCTGCGCAACAAGCTGCTCAAGCTGAAGGCCGGCGGCCAGCCGGAAGAAGCCGCCAAGCTCACCGACACGCAACTGCTGCCCGCGCTCGAAAGCTACGACGCCAGCATCCGCGCGATGGTGACGCTCCAGCAGCAGCAGATCGACCGCACGGCCAATGACATCGAGGCCCAGTACCAGTCGGGCCGCGTCTATCTCATCGTGCTGGCCGTGTTCGCGCTGGCGCTGGGTTCGGTCATCGCATGGCTGCTGACGCGCGGCATCGTGCAGCCCATCGGGGAGGCGCTGCTGATTGCCGAAACCGTGGCCTCCGGCGACCTGAGCCAGGAATTCGAGACCGATCGCGGCGGCGACTTCGGCCGGCTGCTGCGCGGCATGGGCGAGATGGAAGACACGCTGACCGACCTGGTGACGCGCATCAAGGCTTCCACCGATTCGATTGCCGTGGCGTCGCGGCAGATCGCGGCGGGCAATGAAGACCTGTCTTCGCGCACGGAGCAGCAGGCCAGTTCGCTGGAGCAGACGGCGGCTTCGATGGAGGAGCTCACGAGCACCGTGAAGCAGAACGCGGACAACGCACGGCAGGCGAACCAGCTCGCCGTGTCGGCTTCCGCCGTGGCGGTGAAGGGCGGCAGCGTCGTGTCTCAGGTGGTGGACACCATGGGATCGATCAATGCGTCGTCCCGGAAGATCGTCGACATCATCGGTGTCATCGACGGCATTGCCTTCCAGACGAATATCCTGGCATTGAACGCGGCCGTGGAAGCCGCCCGCGCGGGCGAGCAGGGCAAGGGCTTTGCCGTGGTCGCCTCCGAGGTGCGCAACCTGGCGCAGCGTTCGGCGTCGGCGGCCAAGGAAATCAAGACCCTCATCGGCGACTCGGTGGAGAAAGTCGAAGAAGGCAGCAAGCAGGTCAGCGAAGCGGGCCGCACCATGGACGAGATCGTCGGCAGCGTGCGCCGCGTGACGGACATCATGGGCGAGATCACCGCCGCGAGTCAGGAACAAACCTCCGGCATCGAGCAGATCAACCAGGCCATCACGCAGATGGACCAAGTGACGCAGCAGAACGCCGCGCTGGTCGAGCAGGCATCGGCCGCCGCGCAGTCGCTGCAGGAGCAGGCCGACAACCTCGTCAGGGCGGTGAGCACCTTCAAGCTCGACGCCGACGAGACCGTGGCGGCCTGA
PROTEIN sequence
Length: 520
MKNWNTSQRLGAGFAVVLALVVLIAGVGVLRLQAVGEATKDMARQSLVKERLASAWQLGTTTNSVRTVSLLKSNDAAVQDYLQKSIAGTSASISETQKKLEDMLAAPAELALSADIRKKRGDYVELRNKLLKLKAGGQPEEAAKLTDTQLLPALESYDASIRAMVTLQQQQIDRTANDIEAQYQSGRVYLIVLAVFALALGSVIAWLLTRGIVQPIGEALLIAETVASGDLSQEFETDRGGDFGRLLRGMGEMEDTLTDLVTRIKASTDSIAVASRQIAAGNEDLSSRTEQQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASAVAVKGGSVVSQVVDTMGSINASSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVASEVRNLAQRSASAAKEIKTLIGDSVEKVEEGSKQVSEAGRTMDEIVGSVRRVTDIMGEITAASQEQTSGIEQINQAITQMDQVTQQNAALVEQASAAAQSLQEQADNLVRAVSTFKLDADETVAA*