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cn_combo_scaffold_12639_4

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 2227..3963

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=2 Tax=Variovorax paradoxus RepID=UPI00036A15E8 similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 578.0
  • Bit_score: 872
  • Evalue 2.20e-250
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EER58821.1}; Flags: Precursor; Fragment;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 516.0
  • Bit_score: 608
  • Evalue 8.30e-171
methyl-accepting chemotaxis sensory transducer similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 587.0
  • Bit_score: 547
  • Evalue 6.00e-153

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Taxonomy

Acidovorax delafieldii → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1737
ATGCGCTCACTTCTCAATCTCCGCATCGGCACCCGTCTAGGCGCGGATTTTGCCGCCGTGCTCCTGATGCTGGCCGGCGCGATCGGCCTCGGCCTGCATGCCATGGGCAATGTCCAGTCGCGTCTCGAAGGCATCGTCAACAGCAACAACGTCAAGGTGGCCGCGGTCAACACGATGTCGGACGCGATCCGGGAGATCGCCATCCTCGACGGCAACCTGATTCTGCTGACCGAAGACACGGCCATGCGCGAAGAGTCCAAGAAGATCGTCGGCGCCCGGGAGCGCTACGCGGAAGCTCACAAGGTGCTGGAAAAACTGGTCACCACGCCGGAAGGCAAGGCGCTGCTGGCAAGGGCCGACGAGAAGGCGGCCTTGCTCTTGCCCTTGAACGCCCAGCTGTCCGAGCTGGCGCTGCAGAACAAGAACGACGAGGCGACGCAGATCTTCATCGCCAAGTTCCAGCCGGCCGTGCGGAACGTGCTGACTGAACTCGACGCGATGGACGCCAACGAGAACAAGCTGTCCCAGGCGGCCAGCCGGGAGGCGGCCGAAGGCTATGCCTGGTCGCGCAACCTGATGTTCGCGCTGGGCGGCTTCGCGATCCTGTTCGGCGCGGCCATCGCGTGGTTCACCACGCATTCGATCACCCGCCCGATCGGGGAGGCGGTGGAGGTCGCCGAGAAGGTGGCGGCGGGCGACATCACCTCGCGCATCGAGGTGCGTTCGAAGGACGAGACCGGCCGGCTGATGACGGCGCTGAAGGCCATGAACGAAAGCCTGGTCCGCATCGTGCGCGAAGTGCGCATGGGAACGGACACGATCGCCACGGCGTCGAGCCAGATTGCATCGGGCAACCAGGATCTGTCTTCGCGTACCGAAGAACAGGCCAGCTCGCTGGAGCAGACGGCGGCTTCGATGGAGCAGCTGACTTCGACCGTGAAGCAGAACGCGGACAACGCGCGCCAAGCCAACCAGCTGGCCGTCTCGGCTTCGGAGGTGGCCGTGAAGGGCGGCGATGTCGTGTCGCAGGTGGTGGGCACGATGGGCTCCATCGATGCGTCGTCCAAGAAGATCGTCGACATCATCGGCGTGATCGACGGCATTGCCTTCCAGACCAACATCCTGGCGCTGAACGCGGCAGTCGAAGCAGCACGTGCCGGTGAACAAGGCCGTGGCTTCGCGGTGGTCGCATCGGAAGTGCGCAGCCTCGCACAGCGCTCGGCGGCGGCAGCCAAGGAAATCAAGACGCTGATCGGCGACTCGGTAGAGAAGGTCGAGGAGGGCAGCAAGCAGGTCGCCGAGGCGGGCCGCACCATGGAACAGATCGTCGGCAGCGTCAAGCGCGTAACCGACATCATGGGCGAGATCACCGCGGCGAGCCAGGAACAGACCTCGGGCATCGAGCAGATCAACCAGGCCATCACGCAAATGGACCAGGTGACGCAGCAGAACGCCGCGCTGGTCGAAGAAGCCTCGGCGGCGGCCCAGTCGCTTCAGGAGCAGGCCAGCAGCCTCGTGCAGACCGTGAGCATCTTCAAGATCGACGCCAATGCCGTGGCCACCGTGCGCCCCGGCTTCACCCGCATCACGCCCATTCCCAGGCCGGTGGCGAAAACCGTGCGTCCGGTGGCGAAGCAGCCGGCCAAGGCGCTGCCCGCGCGCCGCGCGCCGGTCGCCGCTCCCGCGCCCCAGTTGGCCATGGCCGGCGACTCCAAAGGCGATTGGACCGAGTTTTGA
PROTEIN sequence
Length: 579
MRSLLNLRIGTRLGADFAAVLLMLAGAIGLGLHAMGNVQSRLEGIVNSNNVKVAAVNTMSDAIREIAILDGNLILLTEDTAMREESKKIVGARERYAEAHKVLEKLVTTPEGKALLARADEKAALLLPLNAQLSELALQNKNDEATQIFIAKFQPAVRNVLTELDAMDANENKLSQAASREAAEGYAWSRNLMFALGGFAILFGAAIAWFTTHSITRPIGEAVEVAEKVAAGDITSRIEVRSKDETGRLMTALKAMNESLVRIVREVRMGTDTIATASSQIASGNQDLSSRTEEQASSLEQTAASMEQLTSTVKQNADNARQANQLAVSASEVAVKGGDVVSQVVGTMGSIDASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKTLIGDSVEKVEEGSKQVAEAGRTMEQIVGSVKRVTDIMGEITAASQEQTSGIEQINQAITQMDQVTQQNAALVEEASAAAQSLQEQASSLVQTVSIFKIDANAVATVRPGFTRITPIPRPVAKTVRPVAKQPAKALPARRAPVAAPAPQLAMAGDSKGDWTEF*