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cn_combo_scaffold_12639_5

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 4068..5072

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000374948E similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 335.0
  • Bit_score: 427
  • Evalue 1.40e-116
putative methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 336.0
  • Bit_score: 352
  • Evalue 9.50e-95
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGU51417.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 336.0
  • Bit_score: 352
  • Evalue 4.70e-94

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGAGTTTGAAGGATCTGAAAATCGGCACGCGCCTGGGGCTCGGCTTCGCGGTCATGCTGCTGCTGATGGCTTTCATTGCCGCCACCGGCGTGCTGCGGCTGACCAATGTGGGGCATGCCACCGACGAGATGGTGGAGCAGGCGCTGGTGAAGGAGCGCCTGGCCAACGAATGGCTGAGCAACCTCAAGTCGAACACGGTGGCCAACTTCGCGATGATCAAGACCACCGATCCAGCCGTCGCAGACTATTTCTCCAAACTCCAGGCCGCCGGCTCGGCCCGCATCAGCCCGGCGCAGAAGAAGCTCGAATCGATGCTGGACACGCCGGAAGAAAAGGCGCTCTATGCCAAGGTCGCCGCTTCGCGCGCCGTGGTGCTCGAGACGGTGGGCGTTCTCAACAAGCTCAAGGACAGCGGCCAGCTCGCCGAAGCGAACACGCTGGTCGACACCAAGTTCACCGACGCGCTGGGCGTCTATGGCGGCGCCGTCGAGGCGCTGGCCCAGCACCAGCGCGAGAAGATCGATGCCGCCGCCCGCGGCATCGCCGCCGACTACGTGGCGGGGCGCACCACGCTGGTGGTGCTGGCGTCCATCGCCGTCTTGCTGGGCGCGCTGTTCGCCTGGCGCCTGAGCCTGGGCATCGTGCGCCCGCTGGGCCATGCGGTGGAAGTGGCGCAGACCGTCGCGGCCGGCGACCTGAGCGCCGACATCCGCGTGGAAAGCCGCGACGAAGCCGGCCAGCTGATGCAGGCGCTGAAGAACATGAACGAGAGCCTGGCCAAGGTGGTCGGCGAGGTGCGCACAGGCACGGACACGATCGCGACGGCTTCGAGCCAGATCGCTTCGGGCAACCAGGACCTGTCTTCGCGTACCGAAGAGCAGGCGAGTTCGCTGGAGCAAACCGCGGCTTCGATGGAAGAGCTGACTTCGACGGTGAAGCAGAACGCGGACAACGCGCGTCAGGCGAACCAACTGGCCGTGTCGGCCTCCGAAGTGGCCGTCAAG
PROTEIN sequence
Length: 335
MSLKDLKIGTRLGLGFAVMLLLMAFIAATGVLRLTNVGHATDEMVEQALVKERLANEWLSNLKSNTVANFAMIKTTDPAVADYFSKLQAAGSARISPAQKKLESMLDTPEEKALYAKVAASRAVVLETVGVLNKLKDSGQLAEANTLVDTKFTDALGVYGGAVEALAQHQREKIDAAARGIAADYVAGRTTLVVLASIAVLLGALFAWRLSLGIVRPLGHAVEVAQTVAAGDLSADIRVESRDEAGQLMQALKNMNESLAKVVGEVRTGTDTIATASSQIASGNQDLSSRTEEQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEVAVK