ggKbase home page

cn_combo_scaffold_1607_21

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(26762..27340)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=3 Tax=Xanthomonas oryzae pv. oryzae RepID=Q5H1W3_XANOR similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 192.0
  • Bit_score: 234
  • Evalue 1.00e-58
TetR family transcriptional regulator {ECO:0000313|EMBL:KGO99072.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 189.0
  • Bit_score: 247
  • Evalue 1.20e-62
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 192.0
  • Bit_score: 234
  • Evalue 2.80e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGACCGGAACCGCACCACGCAGCGGGCGCCTGAGCGCCGACGACTGGGCCCGCGAGGCACTGGACCAGATCGCCGAACAGGGCGTGGCGTCGGTGGCGGTGGAGCCGCTGGCGCGCCGGCTGGGGGTCACCAAGGGCAGTTTCTACTGGCATTTCCCCTCCCGCGACGCGCTGCTGCAGGCGGCATTGGAACGATGGGAACGCGACGAACAGAATGCCTACGGCGCGCTGGAATCGATCGGCGATGCCACCGAGCGCCTGCGCACGCTGTTCCGCCTGATCGCACAGCACAACAAGACCCACATCATCTATTCCGAGCTGCTCAAGGCCGGCGGTCATCCCGCGGTGGATGCGGTACTGGGGCACGTGCTGGAGCGCCGCATCGGGTTCCTGTTCACCTCGTTCCGCCAGGCCGGCCTGAGCCAGAAGGACGCGCTCAACCGCGCGCGCATGACCTACGCGATGTACGTGGGGGTGCTGCAGCTGGAGCTGCCCAGGTTCCAGGCCCGCCAGCCCATCGAAGGCTTCGACGGCTACGTCGAACACATGATGGCGACACTGGTTCCACAGAAGAAGTGA
PROTEIN sequence
Length: 193
MTGTAPRSGRLSADDWAREALDQIAEQGVASVAVEPLARRLGVTKGSFYWHFPSRDALLQAALERWERDEQNAYGALESIGDATERLRTLFRLIAQHNKTHIIYSELLKAGGHPAVDAVLGHVLERRIGFLFTSFRQAGLSQKDALNRARMTYAMYVGVLQLELPRFQARQPIEGFDGYVEHMMATLVPQKK*