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cn_combo_scaffold_1971_26

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 24781..26934

Top 3 Functional Annotations

Value Algorithm Source
Type II secretory pathway, component PulD id=2525103 bin=GWF1_Xanthomonadales_69_6 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 716.0
  • Bit_score: 713
  • Evalue 2.10e-202
type II secretion system protein; K02453 general secretion pathway protein D Tax=GWF1_Xanthomonadales_69_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 716.0
  • Bit_score: 713
  • Evalue 3.00e-202
gspD; general secretion pathway protein D similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 750.0
  • Bit_score: 455
  • Evalue 2.20e-125

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Taxonomy

GWF1_Xanthomonadales_69_6_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2154
ATGATTTTCCGACACCGCACCCTAATTGCCTTTGCTGCGTTCGGCGCAGTGCTGCTGGCAGGCTGCAGCAGTACGCCACCGCTGCAGGTGCCGGGGGCGCTGCAACTGCCTGAGAAACCGCAGACCAACAGCGAGCAGGAGCTCAATCGCGCCAGCGAGGGGCCACAACGCCTCACCCAGACGCCAACACCGAGTGTGGACGGCAGCGGGCCCATCACAGCGGGCACCCACATCAGGGATGAACTGCCGCCGATGTCGGCCGGTCCGGTAAGCGTCAATGTCCAAAATGTACCGGTACCGGTCTTCGCCAACGAAGTATTCGGCAACATGCTCGGCCTGAACATGACGATGTCGCCGGAAGTGGCGAAGCTCCAAGAGCTGGTCACCCTGCGTACCGAAACGCGCCAGCAACCGCGTGATCTTTTCCTGCTATCGCGACAGCTGCTTGCCGAATACGGCGTGGCGGTGAGCGTAGAGGGCAAACTGGTCAAGCTCGCCATCGCCCCGAAGGATTCTTCGCTGGTGCCACCCTTGATCATCAGCGGCCGAGCCCTTCCGCAGGTTCCGATGTCGCACCGCCCGGTATTCCAGTTGATTGAGCTGGACGTGGTGCGCAGTGGCGACGCCGCGCGCTGGCTCTCCACCCTGTTCGGTCAGGACATCAAGGTACTGGAAGAAAGTGGCCGCAACTCCATCATCATCAGCGGCAAGCCGACCATGGTGCGACAGGCCGTTGACGCACTGCGTGTATTCGACCGCCCGCTGATGCGCGGACGGGTAAGCACCCGGCTGGAACCGGCCTTCATGAGCGCCGACCAGCTGGCCGACCGACTCGTGGATGTCATGAACGTGCAGGGCTACGGCGCCAACCGCACCGTAGGCTCGCCCTCCAGCGTGATCGTCCTGCCGATCACCGTCGCCAATTCCGTTCTGATCTTCGCCAATACGCAGGAAGCTTTGAATTACGCGGTTTCCTGGGCACGCGAATTGGACAAGCCAAGCAAGCAAGCAGGCTCGCAATCGCTGTTCTACTATCAAGTCAAGAACACCAAGGCTGCCGATATCGCCAGCGTACTTTCAGGCGGGAACATCGGCGCTCCCACGGCCGCTGCTTCCAGTGCGGCGCGCCCCGGGGCAAATTCTGGCGCTGCCCCACCGGCAAACTCTGGCTCCGGCGGCTCAAGCCTGACCAACGGCTCCCTGCAGGTGGACGAACCCCGCAATGCATTGATTTACCAGGGCGATCCCGCCCAGTGGGAGCGGATGCTCTCGCTGATCCGGCAGATGGACAAGGCACCCCGCCAGGTAATGGTGGAGGTGACCATTGCCGAGGTCACCCTGAATGATGACAACTCCTTTGGCCTGAGCTGGTTCGCCAAGAACGGGTTCGGGCGCTTCGATGGCAGCACCTGGATGGGCAAGGGCTCGGGAGGCACGGCAGCCGGAGCAGCGGCCAGCAACGGGCTCACCTACCTGCTGGACGTGGCTGGGCAGAACCGAGCGGCGCTCACCGCGTTCGCGGACGACAACCGGGTCAGCATCCTGTCTACTCCGCGCCTTCTGGTGAAGAGCGGCAGCGAAGCCAACTTCGACGTCGGCACCGAAGTTCCCACCGTGACGATGTCCACAACTTCAAATCAGCAGAGCGATGGGAACACCAACCTGCTGCAATCCATCCAATACCGCAAGACTGGCGTGATCCTGCAGATCAAGCCGACCGTCTATTCGGATGACCGGATCGATCTGGACATTACCCAGGAAGTCAGCGAGGCGATGCCGCTGGGCGATAACGCCACCGCAAATTCGCCTTCAATCTTCAACCGCTCTGTGACCACGTCGCTGAGCCTGCGCGACGGCGGCTCGGTGGTACTGGGCGGACTGATGTCTTCACGCCAGACTGACAGCGACTCCGGCATTCCGCTGGTCAAGGACGTGCCGGTCCTTGGCAACCTGTTCAAAAGCAAGAGCCGCAAGAAGAACAAGACGGAACTGATTGTACTGATCGTGCCCTACATTATCGAAAACGACGAGCACGCCTCGGCTGTCAGCCGCGCTATTGTGGATCAGGCCGAGTTACTTGACCTCCAGCAGTATCCGCGACAACCGCAGGCAGCCCCTGCGAAGTTGCCGCCTTCCCCCACCACCCGCCCTTGA
PROTEIN sequence
Length: 718
MIFRHRTLIAFAAFGAVLLAGCSSTPPLQVPGALQLPEKPQTNSEQELNRASEGPQRLTQTPTPSVDGSGPITAGTHIRDELPPMSAGPVSVNVQNVPVPVFANEVFGNMLGLNMTMSPEVAKLQELVTLRTETRQQPRDLFLLSRQLLAEYGVAVSVEGKLVKLAIAPKDSSLVPPLIISGRALPQVPMSHRPVFQLIELDVVRSGDAARWLSTLFGQDIKVLEESGRNSIIISGKPTMVRQAVDALRVFDRPLMRGRVSTRLEPAFMSADQLADRLVDVMNVQGYGANRTVGSPSSVIVLPITVANSVLIFANTQEALNYAVSWARELDKPSKQAGSQSLFYYQVKNTKAADIASVLSGGNIGAPTAAASSAARPGANSGAAPPANSGSGGSSLTNGSLQVDEPRNALIYQGDPAQWERMLSLIRQMDKAPRQVMVEVTIAEVTLNDDNSFGLSWFAKNGFGRFDGSTWMGKGSGGTAAGAAASNGLTYLLDVAGQNRAALTAFADDNRVSILSTPRLLVKSGSEANFDVGTEVPTVTMSTTSNQQSDGNTNLLQSIQYRKTGVILQIKPTVYSDDRIDLDITQEVSEAMPLGDNATANSPSIFNRSVTTSLSLRDGGSVVLGGLMSSRQTDSDSGIPLVKDVPVLGNLFKSKSRKKNKTELIVLIVPYIIENDEHASAVSRAIVDQAELLDLQQYPRQPQAAPAKLPPSPTTRP*