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cn_combo_scaffold_3212_13

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(14677..15117)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4F0AE similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 145.0
  • Bit_score: 238
  • Evalue 5.30e-60
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KGQ19395.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 146.0
  • Bit_score: 270
  • Evalue 1.80e-69
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 146.0
  • Bit_score: 223
  • Evalue 2.90e-56

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGGATGCCGCGCTGTCGGCACCGGAAGGGCGGCTGCCGGGGCTGGAGGACGTCTGGTTGCAGCTGCATCTGGTGTTCGAGTGCATCTGGGACTACCGCTTCCTCTACCGCGACCTGGTCGACATCCTCAGCCGCAACCGCCGCCTGCGGCTGCGCTTCGCGCGCATCCTCAAGCGCGCCGACGAACAGGCGCACACCGTGATGCGCGGACTGGTGCAGGCGGGGGTGATGCGGGCATCCGCGGCGGAACTGGACGCGGCCGCCACCAACGTGCTGGTGATCGCCACGTTCTGGATGAACTACGCGGCCGCGCGCGGCGACAAGGACGAGCAGGCCTCGATCCGCGACGGCATCGTGCAGGTCATGATGCTGATCGCGCCGTTCTTGCGTGATGCCGAGCGCGTGCACCTCAACACGCTGACGCGCGCCTACATCGACTGA
PROTEIN sequence
Length: 147
MDAALSAPEGRLPGLEDVWLQLHLVFECIWDYRFLYRDLVDILSRNRRLRLRFARILKRADEQAHTVMRGLVQAGVMRASAAELDAAATNVLVIATFWMNYAAARGDKDEQASIRDGIVQVMMLIAPFLRDAERVHLNTLTRAYID*