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cn_combo_scaffold_3875_12

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(12093..13037)

Top 3 Functional Annotations

Value Algorithm Source
Putative mscS family protein BUsg_437 n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SV39_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 285.0
  • Bit_score: 382
  • Evalue 4.90e-103
Putative mscS family protein BUsg_437 {ECO:0000313|EMBL:CCP38654.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xan similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 285.0
  • Bit_score: 382
  • Evalue 6.80e-103
mechanosensitive ion channel protein MscS similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 311.0
  • Bit_score: 376
  • Evalue 7.60e-102

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Taxonomy

Xanthomonas translucens → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGCAGCCCAGCGTTCCCGCCATCACCCCGCAACATGACCAGGCCGCCCGGCTGGCGAACGAGCTGCGTGGCATCGACTGGCTGCAGCTGCTCGAAGCCTGGGGCCTGCGGCTGCTGGCGGCGCTGGCGATCTTCATGGTCGGCCGCTGGTTGGCACGGCGGATGAGCACCGGTCTCGGACGCGTGCTCGGGCGCGCCAACGTGGACGGAACGCTGAGCGGCTTCCTCGGCAACATTGCCTACGCGGTGATGCTCGTGCTGGTGATCATGACCGCGCTGGCCGCCATCGGCATCCCCACTACCTCGATGTTCGCGGTGCTGGGCGCGGCTGGCCTGGCGGTGGGCCTGGCGCTGAAGGACTCGCTGTCCAACATCGCCTCGGGGGTGATGCTGATCGTGCTGCGGCCGTTCCGCGCCGGCGACCACGTGGTGATTGCCGGTCAGGAAGGCACGGTGCTGGAGATCCGGGTGTTCCAGACCAGGCTGCGCGCGTTCGATCACCGCGTGGTGATCCTGCCCAACAGCGAGATCACCACCGCTCCGATCATCAACCATTCGCAGCTGCCGCAGCGCCGCTTCGATGTCACCGTCGGCGTGGGCTACGACGACGACCTGCACAAGGCCCGCACGCTGCTGCTGCAGATCGCCACCAGCGACCCGAAGGTCCTCAAGGACCCGGCGCCGGTGGTGCAGGTGGTCAACCTCGGCGAGAGCAGCGTGGACCTGACCCTGTTCGCCTTCGCCCGCAACGAGGACTTCGGCGATGCGCGCAGCCGGGTCATCGAGGCGATCCGCAACGAGCTGATCGGCAACGGCCTGAACATCCCCTACCCCCAGCGCGACCTGCACGTCTACCATCGCGACGCCGACGGCCGCCCGATCGCCGACATCCTGCTGCGCGGCGTGGCCGATGACGGCGACCTGCCTGCCAGGCGCGAACGCTGA
PROTEIN sequence
Length: 315
MQPSVPAITPQHDQAARLANELRGIDWLQLLEAWGLRLLAALAIFMVGRWLARRMSTGLGRVLGRANVDGTLSGFLGNIAYAVMLVLVIMTALAAIGIPTTSMFAVLGAAGLAVGLALKDSLSNIASGVMLIVLRPFRAGDHVVIAGQEGTVLEIRVFQTRLRAFDHRVVILPNSEITTAPIINHSQLPQRRFDVTVGVGYDDDLHKARTLLLQIATSDPKVLKDPAPVVQVVNLGESSVDLTLFAFARNEDFGDARSRVIEAIRNELIGNGLNIPYPQRDLHVYHRDADGRPIADILLRGVADDGDLPARRER*