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cn_combo_scaffold_4175_10

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(10288..13731)

Top 3 Functional Annotations

Value Algorithm Source
RhsD protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZCP0_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 32.9
  • Coverage: 999.99
  • Bit_score: 527
  • Evalue 3.40e-146
RhsD protein {ECO:0000313|EMBL:ETC87753.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. caro similarity UNIPROT
DB: UniProtKB
  • Identity: 32.9
  • Coverage: 999.99
  • Bit_score: 527
  • Evalue 4.80e-146
RHS repeat-associated core domain similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 999.99
  • Bit_score: 526
  • Evalue 1.70e-146

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Taxonomy

Xanthomonas hortorum → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3444
ATGGATGTGCGGCGTGTTTTCTCGGCTTTTTTTGCCTGCTGTCTGGCCACCTCGGTCATGGCGGCCGATGTCCAGTACCAATTCAACGGCTCGACGTACCCGAGCCTCGGCGCCGCCGAGGCGGCGATGCGCGCGGCCCACCCGAACTGGGCGAGCAGCCTGCATGTCTGCAGCGTCGCCAACGGCACGAACACGGCGACGATCACCTATTGCACGTCGCCACAGGCCGCGCAGTACTGGATCAGCAACTACAGCTCGCCGGGCATCGGCAGCCCCGGCTGCACGGCCAGCACCGGCCCCTTTACGAATTACTGCAACTCCGAAGGGATGCTTGTGTCGGCGCTGTCTGCACGGGTCGCCAACGGCACGACGACATGCCTGGTGGGCGAGAGCGAGTCGGGCTTCTACGCGTCATCCCCGAATGCCTGGGCCACTTCGTACTACAGCTCCGGCGGCAGCAACATCAATTTCGCGGACGCCAGCTACTACAGCGGCCAGAGCACGTCGCGGTGGGTTACGTTCCAGACCCGCGCGTGCTCTGCGCAGAGCAGTGACCCCACCAGCGCGTCGTACTACGAGCTCCGCCTGGATGAGGCGTTTCAGTGCCCGGCTGGCTACACACCGAGCGCTGGCCTGCCGCTGTCCCAGTTCCCGTTCGTCTGTGTCGGCGGATCGGTCACGATCATCAAGCAGGCGGCGGAGAACGTCAGCTCCTGTCCCCACACGGATCACCCGTGCGCGCCGGCGACGGGCGAGAAGCTGCTGACCGAGACGGACTTCACTTGGCGTGGCCATGCGTTCCAGCGGATGTACGCCTCCGGGCACGAGACGCCGGCCAACGCCGGCATGGGCCGGTCGTGGTCGGACAGTTGGGCCGACTCGCTGATCCCGCCCGTACCCTCGCCGAGCGAGTCGGCCCAGTGGCGCAACGGGCGCAATGACCTCGAGACCTTCAAGTTCGCGCCGAACAGCTCGACCACGATGCTCTCCCAGTCCACACCCGGCCGCACTCTGGTGCTGCAGACGGACGGGAGCTGGATGCTCACCGACACCTCGACCACCTTCCGCCATTTCAGCGCGGCCGGCGCGCAAATCGGCGAGGGCGACGTGAACGACCCGGCGGGCCAACTCGCGTTTGCCTACGAGAACGGCCAACTGGCCACGGTCACCGACGGTACCGGACAAAGCCTCACCTTCGGGTACAACACCGCCGGCCAGATGGCCACCATCACCGACGATGCGAGCACGGTGCTGGCCAGCTACGGTTACGACGCGAGCGGCAATCTCACTGCGGCGACCTATCCGGACAGCAAGAGTCGGGCGTATGCCTACGGCGAGTCGACGCACCTGTGCGTTGGCGCGACCGGCGACTGCCAGGCGGCCTATTTCTCCGCCTACCTGACCGGCGTGAGCGACGAGACCGGCCATCGGATCCTCGATGCCACCTATGACGAGTCCGGGCGGGTGGTGTCGAGCCTGCAGCCGTCCGGCTCGACGGCCACGACGCTCAGTTACCCGACGGCCGGGCAGACGCAGGTTGTGGAATCCGGTCAGGGCACGGTGCTCTGGACGTTTACGCAGGATCTCTACCGGAAGCCGGCGTCGCGCAAGGTCTACGATGGATCGCGCCTGGTCAGTACCGAGACGTGGGTGTGGGGCTCCGGGAATACGAGCCTCGCCTACACCGATCCGAATGGCGCGGTCACTACCACCACATACAACGCCGCAGGCCTGCCGGTGACCGAGGTCGATGCGCAGGGCAAGCCCGAGCAGCGGACGATCAAGACGACGTGGAGCACCGGGAGCCAGCCGCAACCGCTGACCGTCACGGTCGCGAACGCCGCCGGCGCGACGGTGCGCGAGACGTCGTACGCCTACAACGGCAGGGGCCAGCTCACCACGACCACAGTGACAGATCCGGAGACCGCCGCGACCCGGACAATCACCAAGGCCTACTGCGAGTCCGCCGATCTCGGTACCGGTGGCTGCGCGCTGCTGGGCCAGCTGAAGTCCGTCACTGACGCCCGCGGGAACGCCAGCGCGTTCGCCTACCGTCTGACTGACGCGACGGGCTGCAACACGGCGCCGGCGACGTGCGCCTACCGCAAGGGCGACCTCTACCAGGTGACCGATGCGGCCGGCCACGTGCGGACGATCAACAGCGTCGACGCCGCCGGGCGTGTGCTGCGCACGACCGACACCAACGGGGTGATCACTGACCTGGCCTACGATCCGCGCGGTCTGCTGACCAGCAGCACGATCCGGGCGAATGCCGACGGCACCCCAGCTACCAGCGACGCCACCACGACGCTCGGCTACGACGCAACCGCTGACGTGACATCGGTGACCGATCCGGACGGCGTGACCGTCCGATATGGCTACGACAGCTCGCAGCGGCTGACCGACATCACCGATGCGCTGGGCAACGCCGTTCACTACACGCTCGATGCCGCTGGCGACCGCACCGGCGAGAGCGTCAAGGACCCGGCCGGCCACCTCGCGCGCTCCCTGAGCCGCGCGTTCAACACCCTCGGACAGTTGCAGACGGTCGTCGACGGCAACGCAGCCACCGTGCTGACCTTCGACCCGAGCGATGGCTACGACGGAGCCGGGCACCCGCAACACACCACGGACGGACTCGGTGTGGTGCGGCGCATGACCTACGACGCGTTGGGGCGGCTCACCACGAAGACCGACGATGTCGGCGGCACGGATCCCGGTACTGCGAACGCGCAAACGGCCTTCGCCTACGACGCGCTGGACCATCTGCAGGGCATCAGCGATCCGTCGGGACTCGACACGGTCTATGACACCAACGCCTTCGGAGATGCCTTGGGGAACCAGAGCCCCGATAGCGGCTCAACAACGATCGCCACCGATGCGGCTGGCAACCCGCTGATCCGCACCGACGCGCGTGGTGTCACGGTGACATCGACGTACGATGCGCTGAACCGGGTGACCAGCGAGAGCTACCCGGATGCCACGCTTGACGTCTCCTACTACTACGACGAAGCAGACGCGGTCACCGGCTGCAGCGACGACTACCCGATCGGCCGGTTGACGCGGATCGTCGAGGCCGACGGCGTTGCCACGACGTATTGCTACGACCGCGCTGGCCGGGTGTTGAGGAAGACGCTCACGGTCGCCGGTGCGACCACCACCACGCAGTACGGCTACACGCTGGCCGGACGCTTGAGCAGCATGACGTACCCGAGCGGTGCAGTGCTCGCCTACACGCGCGACGGCGACGGTCGGATCAGCGCCGCGACGCTCACACCCGCAGGCGGTGGTGCCGCGCAGAGCCTCGTGAGCGCCGTCGCCTACGCACCCTTCGGCGCGGTCGCGAGCTACCAGCTCGGCAGCGGGCAGACAGTGACCCGGGCCTTCGACGCCAACGGGCGCATCTCCGCGGTGAGCAGAGCAGGGATGTCGAGGGCAACGTGA
PROTEIN sequence
Length: 1148
MDVRRVFSAFFACCLATSVMAADVQYQFNGSTYPSLGAAEAAMRAAHPNWASSLHVCSVANGTNTATITYCTSPQAAQYWISNYSSPGIGSPGCTASTGPFTNYCNSEGMLVSALSARVANGTTTCLVGESESGFYASSPNAWATSYYSSGGSNINFADASYYSGQSTSRWVTFQTRACSAQSSDPTSASYYELRLDEAFQCPAGYTPSAGLPLSQFPFVCVGGSVTIIKQAAENVSSCPHTDHPCAPATGEKLLTETDFTWRGHAFQRMYASGHETPANAGMGRSWSDSWADSLIPPVPSPSESAQWRNGRNDLETFKFAPNSSTTMLSQSTPGRTLVLQTDGSWMLTDTSTTFRHFSAAGAQIGEGDVNDPAGQLAFAYENGQLATVTDGTGQSLTFGYNTAGQMATITDDASTVLASYGYDASGNLTAATYPDSKSRAYAYGESTHLCVGATGDCQAAYFSAYLTGVSDETGHRILDATYDESGRVVSSLQPSGSTATTLSYPTAGQTQVVESGQGTVLWTFTQDLYRKPASRKVYDGSRLVSTETWVWGSGNTSLAYTDPNGAVTTTTYNAAGLPVTEVDAQGKPEQRTIKTTWSTGSQPQPLTVTVANAAGATVRETSYAYNGRGQLTTTTVTDPETAATRTITKAYCESADLGTGGCALLGQLKSVTDARGNASAFAYRLTDATGCNTAPATCAYRKGDLYQVTDAAGHVRTINSVDAAGRVLRTTDTNGVITDLAYDPRGLLTSSTIRANADGTPATSDATTTLGYDATADVTSVTDPDGVTVRYGYDSSQRLTDITDALGNAVHYTLDAAGDRTGESVKDPAGHLARSLSRAFNTLGQLQTVVDGNAATVLTFDPSDGYDGAGHPQHTTDGLGVVRRMTYDALGRLTTKTDDVGGTDPGTANAQTAFAYDALDHLQGISDPSGLDTVYDTNAFGDALGNQSPDSGSTTIATDAAGNPLIRTDARGVTVTSTYDALNRVTSESYPDATLDVSYYYDEADAVTGCSDDYPIGRLTRIVEADGVATTYCYDRAGRVLRKTLTVAGATTTTQYGYTLAGRLSSMTYPSGAVLAYTRDGDGRISAATLTPAGGGAAQSLVSAVAYAPFGAVASYQLGSGQTVTRAFDANGRISAVSRAGMSRAT*