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cn_combo_scaffold_4290_5

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 1540..2841

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0V1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 429.0
  • Bit_score: 649
  • Evalue 2.30e-183
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIL93092.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 429.0
  • Bit_score: 649
  • Evalue 3.20e-183
sigma-70, region 4 family protein similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 420.0
  • Bit_score: 520
  • Evalue 3.40e-145

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1302
ATGGCGGGGGTTGGCGATGGTGTCATCGGCGGGATGAAAGCCGATGACCTCCATCGCCGCCTCGATGCCCTGTGGCGGATGGAATCGCCAAAGCTGCTGGCGCGGCTGGCACGCATCACCGGCAACATCGACACTGCCGAGGAACTGGCGCAGGACGTGCTCCTCGCCGCGCTGGAGCGCTGGCCGCGCGAGGGCGTGCCGGACAACCCGGCCGCCTGGCTGATGACCGCGGCCAGGCACCGCAGCATCGGCCACGTCCGCCAGCGCCAGCTGCACGCGCGCAAGCAGGATGAATTCGGCATCGAACTGACGCTGCACGGAGCCGACATGCAGGGCGACGACGCCCAGCGCTTCGCGGACGACGATATCGGCGACGACCTGCTGCGGCTGGTCTTCGCCAGCTGCCACCCGGTCCTGCCGATGGATTCGCGGGTGGCGCTGACCCTTCGCCTGCTGGGCGGCCTGTCGACGCCGGAGATCGCGCGCGCCTTCCTGCAGCAGGAGGCGACGGTGGCGCAGCGCATCGTCCGTGCCAAGCGCGCGCTGGCCTCGGCGCAGGTGCCGTTCGAGGTGCCGCGCAGGGCGGAGTTGCCGGAACGGCTGGAGGCGGTGCTGGAAGTCCTGTACCTGGTCTTCAACGAGGGCTACGCCGCGACCAGCGGCGAGGACTGGATGCGGCCGGCCCTGTGCGAGGAGGCGCTGCGGCTGGGGCGGGTGCTGGCCGGCCTGCTGCCGCGCGAACCCGAGGTGTTCGGCCTGCTCGCACTGATGGAGCTGCAGGCCTCGCGCATTTCCGCGCGGACGCGGGTCAATGGCTCGCCGGTGCTGCTGGCCGAACAGCATCGTGCGCGCTGGGACCGGCTGCAGATCCAGCGCGGGCTGCAGGCATTGGCGCATGCGCGCCAATTGGGTGGCGACGACGGCCGCTACGTACTGCAGGCGGCGCTGGCGGCCTGCCATGCACGGGCACCGCGCTTCGAGGACACCGACTGGGCCGGGATCGCGGCGCTGTATGCACGGCTGATGCATGTCGCGCCTTCGCCGGTGGTCGAGCTCAACCGCGCGGTGGCGGTGGGCAGGGCGCAGGGCGCCGCGGCGGCGCTGCCGATCGTGGATGCACTGGCTGCCGACGCCAAGTTGAGCGGCTACGCACCGTTGCCGGCGGTGCGCGGCGACCTGCTGGAGCAGCTGGGCCGGCGGGACGAGGCGCATGACGAATTCGCCCGCGCAGCGGCGCTGACCGGCAATGCGCGCGAGCGCGAGGCCCTGCTGGCGCGCGCGGCCGCCTGCGCTTCCGCCTGA
PROTEIN sequence
Length: 434
MAGVGDGVIGGMKADDLHRRLDALWRMESPKLLARLARITGNIDTAEELAQDVLLAALERWPREGVPDNPAAWLMTAARHRSIGHVRQRQLHARKQDEFGIELTLHGADMQGDDAQRFADDDIGDDLLRLVFASCHPVLPMDSRVALTLRLLGGLSTPEIARAFLQQEATVAQRIVRAKRALASAQVPFEVPRRAELPERLEAVLEVLYLVFNEGYAATSGEDWMRPALCEEALRLGRVLAGLLPREPEVFGLLALMELQASRISARTRVNGSPVLLAEQHRARWDRLQIQRGLQALAHARQLGGDDGRYVLQAALAACHARAPRFEDTDWAGIAALYARLMHVAPSPVVELNRAVAVGRAQGAAAALPIVDALAADAKLSGYAPLPAVRGDLLEQLGRRDEAHDEFARAAALTGNAREREALLARAAACASA*