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cn_combo_scaffold_4891_10

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(8363..8782)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein H-NS n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUR1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 139.0
  • Bit_score: 116
  • Evalue 2.90e-23
DNA-binding protein H-NS {ECO:0000313|EMBL:EIL90952.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 139.0
  • Bit_score: 116
  • Evalue 4.10e-23
DNA-binding protein H-NS similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 137.0
  • Bit_score: 109
  • Evalue 7.60e-22

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGTCGCGAAACCTGGATGGCATGTCACCCCGTGAGCTCGCCGCGCTCATCAAGCAGGCCGAGGCTCGGCTCGCCGTGTCCCACGCACAGCACATCGATGCGACGCGCAAGAAGATCGAGGCTCTGCTGAAAGCGGCCGACCTGAAGCTCGAGGACGTCTTTCCGCGCTCTACACGCGGTATCGCCAGACGTGCCGGCGCCGGCGTGCCCAAATTCCGGAATCCGCTCGACCCTTCGCAGACCTGGACGGGATTCGGGAAGAAGCCGGCTTGGTTCGTCGCGGCCCTAAAGCGACCTGGCGTGACCGAAGCGACCCTACGCATGTCGTCCGGAGCAATCAGGAAGCCCGCCGACGCGGCGAAGTCATTAAAGCGCGGAAAGGCGCCGGCGAAGCGCGTTCGCCGCCAGCGGAAAGCGTAG
PROTEIN sequence
Length: 140
MSRNLDGMSPRELAALIKQAEARLAVSHAQHIDATRKKIEALLKAADLKLEDVFPRSTRGIARRAGAGVPKFRNPLDPSQTWTGFGKKPAWFVAALKRPGVTEATLRMSSGAIRKPADAAKSLKRGKAPAKRVRRQRKA*