ggKbase home page

cn_combo_scaffold_5034_1

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(1..1212)

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 407.0
  • Bit_score: 549
  • Evalue 8.40e-154
choline dehydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B49017 similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 404.0
  • Bit_score: 568
  • Evalue 4.70e-159
GMC family oxidoreductase {ECO:0000313|EMBL:KGM55228.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daeje similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 408.0
  • Bit_score: 602
  • Evalue 3.20e-169

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
GTGTACGACTACATCATCATCGGTGCCGGCTCCGCCGGCTGCGTGCTGGCCAACCGCCTGAGCGAGGACCCCGCGGCCAAGGTGCTGCTGCTGGAGGCCGGCGGCCGCGACTGGCACCCGTTCGTGCACATGCCGGCCGGCCTGGCCCGGATCGCCGGGCTGAAGTCGATCAACTGGGACTACGCCACAGTGCCGCAGCCGCAGCTGGGCGGGCGCGTGCTGTGGTGCCCGCGCGGCAAGCTGCTGGGCGGCTCCAGCTCGATCAACGCGATGTGCTACATCCGCGGCGTCGCCGCCGACTACGACGCCTGGGCTGCCGGTGGCGCCGAGGGCTGGCATTGGGACAACGTGCTGCCCTACTTCCGCAAGTCCGAGGGCAACACGCGCGGCGGTGACGCCTTCCACGGCGCCGATGGCCCGCTCAGCGTGTCCGACCTGCGCCACGTGAACCCGCTCACCCGCGTCTTCATCGAAGCCGGGCAGCAGGCCGGGCTGTCGGTCAACGACGACTTCAACGGCGCGCACCAGGACGGCGTGGGCCTGTACCAGGTCACCCAGCGCAACGGCGCGCGCTGCTCGGCGGCGGTCGCCTACCTCGACCCGGTCAAGGCGCGACCGAACCTGACCATCCGCACCCACGCCGAGGTCAACCGGATCACCTTCGCGCACGGCCGCGCCAACGGCGTGGTCTGTTCGATCAAGGGCCAGGGCTTCCATTTCGAAGCCGCGCGCGAAGTGATCCTCAGCGGCGGCGCGATCAATTCGCCGCAGCTGCTGATGCTGTCCGGCATCGGCCCCGCCGACGAACTGCGCCGGCTGGGCATCGAGGTGCTGCACGATGCGCCGGGCGTCGGCGCCAACCTCCAGGACCACCTGGACGTGACGACGCTGCAACACTGCACCCAGCCGATCAGCTACGACCGGATCAGCGAGGTCAAGACCGCGCTGCAGTATTACCTCGGCGGCCATCAGGGCCCGGGCACCAGCAACGTGGCGGAGGGAGCAGGCTTCGTACGCTCCAGTCTGGCGCCCGACGCGCGCACCGACATCCAGCTGCACTTCATCCCGGCGATGATCGACGACCACGGCCGCAACCGCCTGCGCGGCGACGGCTACACCCTGCACGCCTGCTTCCTGCGCCCGCGCAGCCGCGGCAGCGTGCGGCTGGCCAGCAACCGCGCCGCCGACAAGCCGATCATCGACCCCAACTAC
PROTEIN sequence
Length: 404
VYDYIIIGAGSAGCVLANRLSEDPAAKVLLLEAGGRDWHPFVHMPAGLARIAGLKSINWDYATVPQPQLGGRVLWCPRGKLLGGSSSINAMCYIRGVAADYDAWAAGGAEGWHWDNVLPYFRKSEGNTRGGDAFHGADGPLSVSDLRHVNPLTRVFIEAGQQAGLSVNDDFNGAHQDGVGLYQVTQRNGARCSAAVAYLDPVKARPNLTIRTHAEVNRITFAHGRANGVVCSIKGQGFHFEAAREVILSGGAINSPQLLMLSGIGPADELRRLGIEVLHDAPGVGANLQDHLDVTTLQHCTQPISYDRISEVKTALQYYLGGHQGPGTSNVAEGAGFVRSSLAPDARTDIQLHFIPAMIDDHGRNRLRGDGYTLHACFLRPRSRGSVRLASNRAADKPIIDPNY