ggKbase home page

cn_combo_scaffold_5085_7

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(4404..7847)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPJ7_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 29.4
  • Coverage: 806.0
  • Bit_score: 295
  • Evalue 1.70e-76
Uncharacterized protein {ECO:0000313|EMBL:EKS31066.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.4
  • Coverage: 806.0
  • Bit_score: 295
  • Evalue 2.40e-76
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 25.3
  • Coverage: 939.0
  • Bit_score: 211
  • Evalue 1.20e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3444
ATGAGCATTCGACACCGCAATAGTGAAAATGTCATCTCGGTGAGGGTGCCGGGAGTCGAGCGCGAATTGTTGTGTGCAAATTCAGATGAGTTCGTGCTTCTTAGAGATCTCAGTTGGGAAGACTTAGTCGCTCTTGTTGACCAGTATGCGGAGGAACACGACGCTGCCTTGACTGAGTTCTTCCTTACCCCGTCGTCCGATATTCGCAAGGGGAATCGAACAAAGGCCTCCCGCGATCTAAAGCTGATCAACCTCGCATCTCCCGAAGCTCTATGTATTCGCGTCATTGGCAAGCCGCGTGGCGGCGGGGTCCGTCAAGTCGCTGGCAAGCACTGCACGATTGAAGCTTTGGGTACTGCGTTAACTAGTATGAATCTCCTTCAAGGGTACATTGAGGGTACTCAAGACTACACTCCAGCTTGGCGCATCATTGAGGAACCTTTCGAGATCCAGCGAGAGGTTGCGCTCCGCATGATGTCTGGGCGAATTCGTTCCATGAGCTGGACGTCTTCTCACAGTGGCCTCGATTCTTTGGCGAGCGCTCAGATTTACGAATTGCTGGATCGCAGCAATTCGGTTGACGAAATGCTAACGAAGTTGTCAGAAGCTCTTCTCTCATGGCTAAACGATCCGGTTCGAAAAGGTGCCAACGGCACCAACTGGGTCGACCTAAATAGGCCCCTCGTACTAGCGTGGTTTGCGACTTGGCTCGCTGAGCGCGGAGTCTTGCTATTTCCCCTCTCGGTAGTCGGACGTGGCCAAGAATTTTATCCGCCCCGATATCGCCATTTCCTCGATGACTGGATTTGTCAGACTGCCAGCGTGAACGAGCGAAGGGCGTACCGGGCGATGGTTGTTGAGACCTATGCGCCGTCGGGCAGCCACGGTTACGAGGACCGCGCATGGTTGTTGCTTCAAACGTTCAACCTTGTCGCGCCAGGAGCAACCGAAGGCATTGTTTCTGCGGCTTCGATCAATGTCGTAAAGCGCGCAGCTCCCAACCTTTTTCGTGAACAAATTGCTGTCCTTTCTGGCGTTTGGCGAATTGAGATGGCACGACAGCGGGCAATGGGAGTGCCAGCGAAAGAGATTCAAGACCAAGCCGATTTGGTTCTGCAATGGAACGCGGCGATTCACGGCGCAAAGGAGGCTCCGATATGGGACTGGGTTGACAATCCGGAAGCGATTATTCCCGCCCATTCTGTTTACTCGCGAAGGGCCCTGATCGTAAGCGACAAGCTTCGATCAAACGTTGAGGAACTACGGCGCGTTTTCCCAATTGTGGCTGGAAATAGTGCAAGCACTATTTCAAGCCGGTTGTCGATCTGGCTTCTATACCTAACATCCATAGACGACGCGGCCGTTCCCTCTTCGCTACTCGAACTTAAGATGGACTTGCTGGAGCCGATCGGCTCTGATCGAAAGGTTCAATCATTTCGTGAATTTATGAACGCGCGCGACATTTCGCCCGCACTTCAGTCGAACGTCTATTCGGCCCTGCGAAGCTCCTGGAAAGCTGTAGCGCAAGAGAGCGGAACCCCCGCGATTCTGTGCCCAGTCACCGACATAATGCTGTACTCAAAAGCAAGGAAGAAGGGACAAAAGCGGCCGGCTTCAACGACCCGACGCTCCATAGACATGGAAATTCTTGAGCTACTTATTGAAGAAAACCAGCTCAACAATTTCGAATTCAGCCGAACCAGAACCCATATTAGCGGCGAGCTCCTGGACTACCGGCACGTGGTAGACCCTCAGTCTGGAACGCTGAAGAGAATTTGGTGGCCCGGAATTGCGGTCTTGATGGACCTGCTATTGCAGATCCCAATTCGGCACAAGCAGGGGCGGTACCTTGATAGTGGTGAGGGCGACGAGTTCATCCTCGACATCAGTTCCCTTGAGCGGCACGCAAACGACAGGCCCACTGCTACTCCAGGTCGGAACGAAGCCTTTATTCAGCGCGTGTCGTTATCTCCGATAAGAAATGAAGCCGGTCTCGGCATGTTCGTAAACACGAATAAGACCGGGCGCGACTACGCCTTTCCGTGGCTGCAGAAGGAAATAGCCCTGAGAGTGAAGTCAGTCATTGATTGGCAAATGACTTACAACCCGATTTCCGAACCCGTTTCTGATCGGGCCGACACAAAGGAGGAGCGAGCTGCGAATGCGGTAACCACGATGGTTTACCCGATATTCCGTGACCCAGGAAGGCCAGGTGGAACCCCTGTCAGCGCTGAGATCGTCTTAGACTATTTTCGGGCGCTGATGAGACAAGTAGAGAAAAAGTACAATCTTCGCAACAACACAAGTCTTTCATTCTTTCGTGCCAACGGCGAGCCTGTATTTGACATCCACTCACTACGGGTCACTGGGGTTACTCGTCTCCTGAGTCTTGGGGTGGACCCGAAGATAGTAAGAATGCTCGTTGGACATTCCGCTCTAGTCATGACCTGGTATTACGAGAATATCTCGAACGAGCGCGTTTCAGCGGCGATCCATGCAGCGCTTGAACGGACCCGGCCTAGCCGAGAAGCTCTATTAGCGATGCCTGTGGAGGATCGGGAGCGCTTTCTCGGGCGGTTAATGGGGCGCAGCGAAGGGAGCAATCTGGCGATCTCCTTATTGCGCGATTCAGTAGAACAAAGAAGCCCGCTTCTCGATATTCGAACCGATGGGTTTTGCCCGGGAATGCGGTGCAGCGATGCCGGAGTGTGGAGGCCTCGCGCCTGTAGTTTGTGCAAGTATTTTTCTACAGGCCCAGCCTTTCTCGCTGGGCTTGAGCTTCGCCTGAATGGATTGATGGCGGAAATCATTCTGGAACAGAAGGTCGTGGCCGAGCTGAGAGAGAAGCTGTTTCGCCGCCGCGCAGAAGGGGGGTCGATCGCGACTTTGTCGGCTGAAATTACAACGCGAGAATCGTTGATCGACAACATCGTCACTGAGTGGGAGGCTCAGTTCCAGTATGTGAAACGCGCAGAGGCTGAACTTCAGGCTTGGCTGAAAGACGATCAGTTATCCGCAGCACCCAATGCTCCTAGTGGTGAGCTAACACTCTTTGCGCGTTCACCCGAGGGGGTGGGCGTCGCATTACAAGAATCACACCATCTGGTGTTATTCACTCGTTTGATTGAAGGCGCTAAGAAAATTGATGGATTCGCGCCCGCGGTTGGCACTCGCGAGGCAAGAGACGCACTCTTGTTGGAAATTGTACGCCATGAAGACAAATCGAGTCTCTTCTTGCGGCTGAACCGTGAGGTTCGTCGCGAGGCGCTCGATCAATTTGCACTTTTCATCATGGACCAGGATCTTTCTCCTGACGCAATCGAGGGCCTTGTCGAGGGCACGCGATCACTTTCCGAAGTGGGAGGGGCGGAGGAGTGGCTTCATAGGCTCGATTCACCGCCTCGATCCATTGAGCATAGTCAAGTGAAGGAGCAAGTTCCATGA
PROTEIN sequence
Length: 1148
MSIRHRNSENVISVRVPGVERELLCANSDEFVLLRDLSWEDLVALVDQYAEEHDAALTEFFLTPSSDIRKGNRTKASRDLKLINLASPEALCIRVIGKPRGGGVRQVAGKHCTIEALGTALTSMNLLQGYIEGTQDYTPAWRIIEEPFEIQREVALRMMSGRIRSMSWTSSHSGLDSLASAQIYELLDRSNSVDEMLTKLSEALLSWLNDPVRKGANGTNWVDLNRPLVLAWFATWLAERGVLLFPLSVVGRGQEFYPPRYRHFLDDWICQTASVNERRAYRAMVVETYAPSGSHGYEDRAWLLLQTFNLVAPGATEGIVSAASINVVKRAAPNLFREQIAVLSGVWRIEMARQRAMGVPAKEIQDQADLVLQWNAAIHGAKEAPIWDWVDNPEAIIPAHSVYSRRALIVSDKLRSNVEELRRVFPIVAGNSASTISSRLSIWLLYLTSIDDAAVPSSLLELKMDLLEPIGSDRKVQSFREFMNARDISPALQSNVYSALRSSWKAVAQESGTPAILCPVTDIMLYSKARKKGQKRPASTTRRSIDMEILELLIEENQLNNFEFSRTRTHISGELLDYRHVVDPQSGTLKRIWWPGIAVLMDLLLQIPIRHKQGRYLDSGEGDEFILDISSLERHANDRPTATPGRNEAFIQRVSLSPIRNEAGLGMFVNTNKTGRDYAFPWLQKEIALRVKSVIDWQMTYNPISEPVSDRADTKEERAANAVTTMVYPIFRDPGRPGGTPVSAEIVLDYFRALMRQVEKKYNLRNNTSLSFFRANGEPVFDIHSLRVTGVTRLLSLGVDPKIVRMLVGHSALVMTWYYENISNERVSAAIHAALERTRPSREALLAMPVEDRERFLGRLMGRSEGSNLAISLLRDSVEQRSPLLDIRTDGFCPGMRCSDAGVWRPRACSLCKYFSTGPAFLAGLELRLNGLMAEIILEQKVVAELREKLFRRRAEGGSIATLSAEITTRESLIDNIVTEWEAQFQYVKRAEAELQAWLKDDQLSAAPNAPSGELTLFARSPEGVGVALQESHHLVLFTRLIEGAKKIDGFAPAVGTREARDALLLEIVRHEDKSSLFLRLNREVRREALDQFALFIMDQDLSPDAIEGLVEGTRSLSEVGGAEEWLHRLDSPPRSIEHSQVKEQVP*