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cn_combo_scaffold_5171_7

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 7977..8264

Top 3 Functional Annotations

Value Algorithm Source
Type IV conjugative transfer system protein TraL n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B9P8_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 92.0
  • Bit_score: 86
  • Evalue 1.30e-14
IncF plasmid conjugative transfer pilus assembly protein TraL; K12068 conjugal transfer pilus assembly protein TraL Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 94.0
  • Bit_score: 99
  • Evalue 2.70e-18
conjugal transfer protein TraL similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 94.0
  • Bit_score: 73
  • Evalue 4.10e-11

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGGAACGAGTCCCCTTTCCCAAGGACGTCGACGCGCCACAGCGCTTCCTACTGTGGACGATGGATCAGTTCATCCCGTTCGCGGCCCTGCTGGGGCTCGGGATTTTCTTCCACGCGCTCTTTACATCAATCGTTCTTGGCGTCGGCCTGAGCTGGGGCTTTAGCCGGTACAAGGACAGCAAGCCTGACGGCTTCCTGATGCACCTCGCGCATTGGTACGGGGTTGTCTCACCCTCGAAGTTGCGCGTGGGGATCAATCCCTTCATTCGCCGGATCTTCCCGACATGA
PROTEIN sequence
Length: 96
MERVPFPKDVDAPQRFLLWTMDQFIPFAALLGLGIFFHALFTSIVLGVGLSWGFSRYKDSKPDGFLMHLAHWYGVVSPSKLRVGINPFIRRIFPT*