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cn_combo_scaffold_5224_2

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(674..2773)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00035FF96D similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 697.0
  • Bit_score: 778
  • Evalue 6.80e-222
Membrane protein {ECO:0000313|EMBL:EYR70082.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.; similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 703.0
  • Bit_score: 812
  • Evalue 3.50e-232
membrane protein similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 697.0
  • Bit_score: 779
  • Evalue 6.60e-223

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2100
ATGGCCACAGGCAAAGATATTGCGCTGCGACTGATGCTGGTGGCCGATCTGGTCAATGAGGCCGAGGCCCTGGTCAGCCGCCTGCGCAACGCCGGGACCGCGGTGCGCCCGCTGCGCCCGGAGTCGCTGGACGAAATGGTCGGGATGCTGGCCCAGCAGCCGGTCGACATGGTGCTGGCCGACTACGCCGCCGCGCTGCTGCCGTTCGAACAGGTGGCCAAGGCGGTCATCGGCTGCGGCCGCGATGTGCCGTTGCTGGCCACGCTGGACGGCATCAGCGACGACATCCTGGAGAACGTGCAGGCGCTGGGCGCGCAGGCGGTGGCCCTGCGCGACCGCCCGCAGCAGTTCCTGAAGACCGTGCAGACCGAGTGGCAGGCGCTGGAGGCCCGCCGCACCCAGCGCCGGCTGGAAGCGCAGATGCGCGAGACCCAGCGCCGCTGCGACATGCTGATCGACTCCTCGCGCGAGCCCATCGCCTACATCCACGAGGGCATGCATATCCGGGCCAACCAGGCCTACCTGGAGATGTTCGGCTTCGAATCGTTCGAGGACATCGAGGGGATGTCGCTGCTCGACCTGGTGGCCCCCGGCGACGTGACCGCGTTCAAGGCGCTGCTCAAGAGCCTGTCCAAGGGCGAGGAAGCGCCGCCGCGCTACGAACTGACCGCACACGACGCCGACGGCAACGAGTTCCCGGCGGTGATGGAGTTCACCGCCGCGCAGTACCAGGGGGAGGCCTGCCAGCAGGTGATCTTCCGCCACCAGGCCTCCGAGGTGGATCCGGAGCTGGCGCGCGAGGTCGAGGAACTGCGCCAGCGCGACCAGAGCACCGGCCTGCTCAACCGCCCCACCTTCCTGCGCGTGCTGGAAGACGCGGTGGCGGACGCCGCCCAGCAGCGCGCGCAGTACGGGCTGCTGCTGCTGGAGCCCGACAACTACCAGCGCATCCTGCAGGAGATCGGACTGGACAGCGCCGACGACCTGCTGGCGGCGATCGCCGACTGCATCCGCCAGGTGGTCGGCGAGCAGCTGGCCGACGGCAGCGCCCACGCGGCGCGCTTCAGCGAACACAGCTTCGCGGTGCTGGCCCGCGGCGACCATGCCCGCACCGCCGCACTTGCCGAGCGCATCATCGCGGCGTTCGCCGCGCGCGTGTTCGAGGTCGGCGGCAGCTCCAGCAGCATCACCGCAAGCATTGGCGGCGTGCAGATCGGCGAGAAGATCGCCAGCGTCACCCAGGTGCTGGCCAAGGCCAGCCAGTGCCTGCAGTCGTCGCTGGGGGTGGGCGGCAACCATGCCGAAGTGTTCGATCCCAGCGCCACCGATCGCGCCGAGGAGGAGCGCATCCAGGCCTGGGTGGAGCGCCTGCACGATGCCCTGGCCAACGACCGCTTCCTGCTGCACTACCAGCCGATCATCCACCTGCTGGGCGAGCCGCGGGCTATGTACGAAAGCTATCTGCGGCTGGAATCGGGCACCGGCGAGATCATCACCCCGATGAACTTCCTTCCGATCGCCGAGGAGCACGGGCTGCTGGGGCAGATCGACCGCTGGGTGATCGGCCATGCGATTTCGGTGCTGGGCGCGCGCGCGCGCGCGGGCAAGCCGGTCACGCTGCTGGTGAAGATCACCCAGGCCTCGCTGCAGGATCCCAGCCTGCCCGCCTACATCGCCGAGCAGCTGGCCGCGCACGGCGTGCCGGGCGATGCACTGCTCCTGCAGGTGCCGGAATCGAAGGTATTCATCAATCTGCGCGCCACCCAGGATTTCGCCGCCGCGATCGGCAGCTTGGGTTGCAAGCTGGTGCTGGAGCAGTTCGGCGCCGGGCTGGACTCGTTCCAGCTGCTGTCCCACTTCACCCCGGGCTTCGTCAAGATCGACCGCAGCTTCATGGAAGACCTGTCGAAGAACCCGAACAACCAGAACCGGGTGCGCGAACTGGCGCAGAAGGCGCGCGACCAGGGCATCCAGAGCATCGCCGAGTTCGTGCAGGACGCCGCCAGCATGAGCATCCTGTTCTCGCAGGGCATCGACTACGTCGAGGGCAACTTCCTGGCCATCGCCGGCCCCGACATGAACTACGAGTTCGACGCCTGA
PROTEIN sequence
Length: 700
MATGKDIALRLMLVADLVNEAEALVSRLRNAGTAVRPLRPESLDEMVGMLAQQPVDMVLADYAAALLPFEQVAKAVIGCGRDVPLLATLDGISDDILENVQALGAQAVALRDRPQQFLKTVQTEWQALEARRTQRRLEAQMRETQRRCDMLIDSSREPIAYIHEGMHIRANQAYLEMFGFESFEDIEGMSLLDLVAPGDVTAFKALLKSLSKGEEAPPRYELTAHDADGNEFPAVMEFTAAQYQGEACQQVIFRHQASEVDPELAREVEELRQRDQSTGLLNRPTFLRVLEDAVADAAQQRAQYGLLLLEPDNYQRILQEIGLDSADDLLAAIADCIRQVVGEQLADGSAHAARFSEHSFAVLARGDHARTAALAERIIAAFAARVFEVGGSSSSITASIGGVQIGEKIASVTQVLAKASQCLQSSLGVGGNHAEVFDPSATDRAEEERIQAWVERLHDALANDRFLLHYQPIIHLLGEPRAMYESYLRLESGTGEIITPMNFLPIAEEHGLLGQIDRWVIGHAISVLGARARAGKPVTLLVKITQASLQDPSLPAYIAEQLAAHGVPGDALLLQVPESKVFINLRATQDFAAAIGSLGCKLVLEQFGAGLDSFQLLSHFTPGFVKIDRSFMEDLSKNPNNQNRVRELAQKARDQGIQSIAEFVQDAASMSILFSQGIDYVEGNFLAIAGPDMNYEFDA*