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cn_combo_scaffold_5692_4

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(1892..2572)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000312E5C4 similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 215.0
  • Bit_score: 316
  • Evalue 1.80e-83
Membrane protein {ECO:0000313|EMBL:KGM51912.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis K similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 215.0
  • Bit_score: 350
  • Evalue 2.10e-93
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 215.0
  • Bit_score: 314
  • Evalue 2.50e-83

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Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGCCTCCCGCCCCCTCGCTTGGCCTGCGCCTGCAGCGCCTGTTCCTGACCGGCCTGCTCACCCTGCTGCCGCTGTGGCTGACCTGGGTCGTGGTGAAGTTCGTGTTCGTGCTGTTGGGCGGACTCAGCAAACCGCTGGTCGAACCAGGCCTGCAGGGCATCGCGGCGGGTAATCCACGCACCTTCGGTTGGCTGGTGGAGCCATGGGTGCAGAACGCCATCGCGCTGGCGGCCACGGTGGGCTTCATCCTGCTGGCCGGCTGGCTGGCACGGCGGGTGGTGGGGCAGCGGTTGCTGCGCTGGTTCGAGGCGCTGGTGGCGCGGATTCCGCTGGCCAGCACCATCTACGGCAGCGCGCGCAAGCTGCTGGACATCCTGCAGACCAAGCCCGACGGCACCCAGCGGGTGGTGCTGATCGACTTTCCGCACAACGAGATGAAGACGCTGGGCTTCGTCACCCGCGTCATGCGCGAAATTGGAACTGGCCGCGAGCTGGCGGCGGTATACGTGCCGACCACGCCCAATCCGACCTCGGGCTATCTTGAAATCGTGCCGATGGAAAAGATCACGCCCACCGACTGGACCGTGGACCAGGCGATGAGCTTCATCATCAGCGGCGGCGCGGTGGCCCCGGACGCCATTCCGTTCGCGCCTCCGCCGGCCAGGCCGGCCGAGGCATGA
PROTEIN sequence
Length: 227
MPPAPSLGLRLQRLFLTGLLTLLPLWLTWVVVKFVFVLLGGLSKPLVEPGLQGIAAGNPRTFGWLVEPWVQNAIALAATVGFILLAGWLARRVVGQRLLRWFEALVARIPLASTIYGSARKLLDILQTKPDGTQRVVLIDFPHNEMKTLGFVTRVMREIGTGRELAAVYVPTTPNPTSGYLEIVPMEKITPTDWTVDQAMSFIISGGAVAPDAIPFAPPPARPAEA*