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cn_combo_scaffold_5730_12

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(11490..12899)

Top 3 Functional Annotations

Value Algorithm Source
Phytochrome-like protein cph2 n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T4U0_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 467.0
  • Bit_score: 603
  • Evalue 2.00e-169
Membrane protein {ECO:0000313|EMBL:KGQ20792.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 466.0
  • Bit_score: 634
  • Evalue 1.10e-178
membrane protein similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 470.0
  • Bit_score: 598
  • Evalue 1.80e-168

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
GCGCGCAAGCAGGCGCAGGACCGGCTGGTGCAGGCCCATGCCAATCTGGAGCAGCGCGTCAGCGAGCGCACCCGCGAACTGGCGGAGGCCAACGCGGAGTTGGTCGAGCAGATCGGCGAGCGCATGCGCGCCGAGCGCAAGCTCATCCACCAGACCCGGCACGACGCACTGACCGGGCTGCCCAACCGGCTGCAGTTGCTGGAACGGCTTGGGCGCGCGATCGCTTCGGCTGCGGACAATCCGCAGGCCTGTTTCGCCGTGCTGTTCATGGACCTGGACCGGTTCAAGCTGGTCAACGACAGCGTGGGCCATGCGGTGGGGGACGAGCTGCTGGTCGAAGCCGGCCGGCGCATCGTCGGCGCCGTGCGGGGCGACGACGTGGTCGCCCGCCTGGGCGGCGATGAATTCGCCATCCTCGCCGAAGGGCTGGACGGTTCGGGCATGGCCGAAGAGCTCGGTCGGCGGGTGCTCTCGGCGCTCAATGCCCCGCTGTGGGTGGCCGGGCGCGAGCTGTTCCCCAGCGCCAGCATCGGCATCGCGCTGTGGGATCCGCGCTATCGCAGCGGCGAGGAGATGCTGCGCGACGCCGACGCCGCGATGTACCGCGCCAAGAGCGACGGGCGCGACCGCTGCGCGATGTTCGACGAACAGATGCACCGCGAGGCGACCCGCAGCCTGGACATGGAAACCGACCTGCGCCGGGCGATCCAGGCCGAAAGCTTCGTGCCGTATTACCAGCCGATCGTGCGGATGGATTCCGGCGAGCCGGTGGGTCAGGAGGCGCTGCTGCGCTGGCGGCACGAACAGCAGGGCCTGCTGGTGCCGGGCGAGTTCCTGGACGTGGGCGAGGACAGCGGGCTGATCGAGCAGATCGACTGGCTGCTGTACGCGCGCGTGGTCGAGGACCTGGCCCGCCATCCGCTGCCCGGCTACGCGGCGATCAACGTCTCTCCGCGGCACTTCCGCGCGCCCGATTTCGCCCACCGCCTGCTGTCGCTGCTGGCGTCCGCGGGGGTGGCGCCCACGCGACTGCGGATCGAGATCACCGAAGTCGCGCTGCTCGACGACGCCCCGCGCACGCTGGAAAGCCTGGCGCTGCTGCGCAGCCACGGCGTGCTGGCCCAGCTGGACGATTTCGGCACCGGCTTCTCCGCGCTGTCCTACCTGCACCGCTTCCCGATCGCGAGCCTGAAGATCGACCGCAGCTTCGTGGCCGGGCTGGAGAGCGATGGTTACGCCGAGAGCGTGGCGGTGATCCGCGCGATCGTGGCGCTGGCCACCAGTCTGGGCATCGAACTCATCGCCGAGGGCGTGGAAACCCGCCACCAGCGCGACCGCCTGCTGGAGCTGGGCTGCATCTACGCGCAGGGTTTCCTGTTCAGTCCGCCGGTGCCGCTGCCGGCGGGCTGA
PROTEIN sequence
Length: 470
ARKQAQDRLVQAHANLEQRVSERTRELAEANAELVEQIGERMRAERKLIHQTRHDALTGLPNRLQLLERLGRAIASAADNPQACFAVLFMDLDRFKLVNDSVGHAVGDELLVEAGRRIVGAVRGDDVVARLGGDEFAILAEGLDGSGMAEELGRRVLSALNAPLWVAGRELFPSASIGIALWDPRYRSGEEMLRDADAAMYRAKSDGRDRCAMFDEQMHREATRSLDMETDLRRAIQAESFVPYYQPIVRMDSGEPVGQEALLRWRHEQQGLLVPGEFLDVGEDSGLIEQIDWLLYARVVEDLARHPLPGYAAINVSPRHFRAPDFAHRLLSLLASAGVAPTRLRIEITEVALLDDAPRTLESLALLRSHGVLAQLDDFGTGFSALSYLHRFPIASLKIDRSFVAGLESDGYAESVAVIRAIVALATSLGIELIAEGVETRHQRDRLLELGCIYAQGFLFSPPVPLPAG*