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cn_combo_scaffold_5849_6

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(5700..6800)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, rnd family, mfp subunit n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT24_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 376.0
  • Bit_score: 304
  • Evalue 1.50e-79
efflux transporter, rnd family, mfp subunit similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 376.0
  • Bit_score: 304
  • Evalue 4.30e-80
Efflux transporter, rnd family, mfp subunit {ECO:0000313|EMBL:AER56089.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 376.0
  • Bit_score: 304
  • Evalue 2.10e-79

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Taxonomy

Pseudoxanthomonas spadix → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGCGCCGTCTCCCCGCCGTTCTTCTCCTGACCTCCGCGCTGCTGGCGCTCACCGCCTGCGGCTCCTCCAACGACGCCGCGCCAATGGAAGCCGCCCCGCAGGCCGACGCCCAGGGCCGGATCCGCCTGAGCGCCGCGCAGACCGCCAACCTCGGCATCCAGCGCACCCCGGCGGTGGCTGCCGACAGCGTGCCGGTCACCGGCCTGCCGGCCGAGGTCACGGTGCCGCTGGCCTCCAGTGCGCAGGTGACCATGCCGTACGCCGGGGTGGTGACGCGGGTGCTGGTGGACGAAGGCGAGACCGTGCGCCGCGGCCAGCCGATGCTGCGGGTGCAGAGTCGCGAGCTGGTGGCGGTGCAGGCCGACTACGCCAGGGCCCGCGCCGAATCCGGGCTGGCGGCGCAGCAGGCCCAGCGCGACGCGCTGCTGCAACGCGAAGGGCTGATACCGGCCGCGCGCGCGCAGGAAAGCCGGGCGCGGGCACAGGTGGCCAGCGCCAGCCTGCAGCAGGCCGGTGCTTCGCTGGCGCAGCTGCGGCCCAGCGGCGGCGCGGCCGGCGAGTTCGAACTGCTGGCCCCGCAGGCCGGCCGTGTGGTGCACAGGCAGGTGGCGCCGGGACAGGCGCTGGAAGCGTTGGCCGCGGCCTTCACCCTCGCCAGCGACGACCGCCTGGACCTGGAATTCGCGGTGCCGGTGGAACTGGCGACGCAGCTGCGCGTCGGCCAGCCGGTGGCGCTGCCCGGCGGCGCCACGGCAAGCGTGGCGGCGGTGGGTGGCGACGCCGACGCCGGCGCCCAGAGCCTGCGCGTGCGCGCGCAGTTGGCTGCCGGCAGCGGGTTGCTGCCGGGCCAGCAGCTGGACGTGACCCTGCAGCTGCCGGCCCCCGCCGGCGCGGTGGCGGTGCCCGTGGGCGCGCTGCTGCAGGACGGCGATGGCCACCTGCTGTTCGTGCTCGAAGGCGATGCCTGGCGCGGCCTGCCGGTGCGCCTGCTGGGCGGCGACGGGCGCCACGCCATCGTCACCGGCGAAGGGCTGAGCGCCGGGCTGCCGGTGGCGAGCGCCGGCGCCAACCTGCTCAAGACCCTGACGGCGGCGGAGTAG
PROTEIN sequence
Length: 367
MRRLPAVLLLTSALLALTACGSSNDAAPMEAAPQADAQGRIRLSAAQTANLGIQRTPAVAADSVPVTGLPAEVTVPLASSAQVTMPYAGVVTRVLVDEGETVRRGQPMLRVQSRELVAVQADYARARAESGLAAQQAQRDALLQREGLIPAARAQESRARAQVASASLQQAGASLAQLRPSGGAAGEFELLAPQAGRVVHRQVAPGQALEALAAAFTLASDDRLDLEFAVPVELATQLRVGQPVALPGGATASVAAVGGDADAGAQSLRVRAQLAAGSGLLPGQQLDVTLQLPAPAGAVAVPVGALLQDGDGHLLFVLEGDAWRGLPVRLLGGDGRHAIVTGEGLSAGLPVASAGANLLKTLTAAE*