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cn_combo_scaffold_6021_3

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(2731..4425)

Top 3 Functional Annotations

Value Algorithm Source
GGDEF signaling protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B381E3 similarity UNIREF
DB: UNIREF100
  • Identity: 49.9
  • Coverage: 561.0
  • Bit_score: 526
  • Evalue 3.80e-146
Two-component system sensory histidine kinase {ECO:0000313|EMBL:KGQ18217.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 555.0
  • Bit_score: 594
  • Evalue 1.20e-166
two-component system response regulator protein, putative signal protein with GGDEF, EAL and two component receiver domains similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 565.0
  • Bit_score: 513
  • Evalue 9.30e-143

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1695
ATGAGCGCCGCGCACGGCGAGGCCGGCGCGGACGCGGCACCGTTCCGCGTGCTGATCGTCGAGGACGACCGCAGCCAGGCGATCTTCGCCGAGGCGATCCTGCGCGGTGCCGGCATGCAGGCGGAAGTCGTGGCGATGCCCGAGCGGATGATGGAGGCGATGGAGCGCTTCGATCCCGACCTGGTGCTGATGGACCTGCACATCCCCGGTTCCAGTGGCACCACTCTGACCGCGCAGATCCGCGAACACCCGCGCTTCGAGCACACCCCGGTGGTGTTCCTGACCGGCGACCAGGATCCGGAGCGCCAGGTTGAAGTGCTGGAGCACGGCGGCGATGACTACCTGCTCAAGCCGGTGCGCCCGCGCCACCTGATCGCGGCAGTGCAGAGCCGAGTCAAGCGCGCGCGCGCGCTGGCCAGCAGCCGCATGGCCACGGTGGACAGCGACCGCCACCCGGTCACCGGCCTGTATACCCGCCCGGCCCTGATGAAGGCGCTGGCCGCCCAGCTGGCCCAGCGCACCCCCGGTGGCGCGCTGCTGGTGGAGATGGGCAATGCGGCGGCGCTGCGCAAGCATTACGGCTATGCGGCGTTCGAGAACCTCATCAATGACGCTGGCCGCTACCTCGGCAGCCTCGCCCAGGACCACATCACCGCGCGTCTGAGCGACAACGCCTTCCTGGTCGTGGTGCGCGGGCTCGAGCGCGGCGCGCTCGACGCCTATGCGCGCAACCTGCGCGACGGCGTGGGCTACCACGACTTCCAGACCGACGGCGACACCCTCCGGCTGCGCTGCACCATCGGCTACACCACCTTCGAGCCCGGTTTCACCGATGCCGGCGCGGTGCTCTCGGCCTGCGAGGACGCGGCGCGCGAAGCCCAGGGTTCGCCGATCGGCCTGGCCGCCTACGTGCCGCCGGATACCGCGGTCTCCAGCGACGTGGCCGACGAGCTGCGCGCAGCACTGGTCTCCGGCGACGACACTCTCTACCTCGCATTCCAGCCCGTGGTGGCGGTGGCCGGCGGCGACGACGCGCAGTTCCAGGTACTGGTGCGCATGCGCGGCCCCGACGGCAACGTGCGCAGGGCAGGCGAATTCCTGTCCGCCGCGCAGTCCGCCGGACTGATGCCGCAGGTCGACCGCTGGGTGATGGAACACGCCCTGGCGCTGCTGCAGAAGCGGCGCGCGGAAAGCCGGCCGATGCGCCTGTTCGTCTCGCAGTCACCCAGCACGCTGGCGCAGGACAGCTATGTCGGCTGGCTGCTGCAGGCGCTGGAGCGCCACAACGTCGATCCGTCGTCGCTGGTCATCGACCTGCGCCTGGACGACGCCGTGGTGCACGTGGTGCTGCTGCACCAGTTCTGCGAGCAGCTGGTCCCGGCCGGCGTGCAGTTCTGCCTCAGCCAGTTCCGCCGCGGCGAAGATGCTAACCAGCTGCTGCAGGAATTGCCGCTGGGCTACCTGCGCCTGTCCGCCGACTTCGCCCGTCAGCCGCTGCCACCCGAACTGCACGACGAGATGCGCGACGTGATCGAGCGCGCGCACAGGCTTGGCCTGCAGGTGATCGGACAGGCGGTGGAAGACCCGCAGGCGGCGGCCGCGCTATGGGTGGGCGGCATCGACTTCATCCAGGGCAACCTGGTGCAGCGCCCGGAGCAGGCGCTGGACTTCGACTTCAGGAGCGCGACCTTGTGA
PROTEIN sequence
Length: 565
MSAAHGEAGADAAPFRVLIVEDDRSQAIFAEAILRGAGMQAEVVAMPERMMEAMERFDPDLVLMDLHIPGSSGTTLTAQIREHPRFEHTPVVFLTGDQDPERQVEVLEHGGDDYLLKPVRPRHLIAAVQSRVKRARALASSRMATVDSDRHPVTGLYTRPALMKALAAQLAQRTPGGALLVEMGNAAALRKHYGYAAFENLINDAGRYLGSLAQDHITARLSDNAFLVVVRGLERGALDAYARNLRDGVGYHDFQTDGDTLRLRCTIGYTTFEPGFTDAGAVLSACEDAAREAQGSPIGLAAYVPPDTAVSSDVADELRAALVSGDDTLYLAFQPVVAVAGGDDAQFQVLVRMRGPDGNVRRAGEFLSAAQSAGLMPQVDRWVMEHALALLQKRRAESRPMRLFVSQSPSTLAQDSYVGWLLQALERHNVDPSSLVIDLRLDDAVVHVVLLHQFCEQLVPAGVQFCLSQFRRGEDANQLLQELPLGYLRLSADFARQPLPPELHDEMRDVIERAHRLGLQVIGQAVEDPQAAAALWVGGIDFIQGNLVQRPEQALDFDFRSATL*