ggKbase home page

cn_combo_scaffold_6366_7

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(6505..8988)

Top 3 Functional Annotations

Value Algorithm Source
Type-IV secretion system protein TraC n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B9P2_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 798.0
  • Bit_score: 826
  • Evalue 2.60e-236
Uncharacterized protein {ECO:0000313|EMBL:KHM92211.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicat similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 798.0
  • Bit_score: 826
  • Evalue 3.60e-236
conjugal transfer protein TraC similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 782.0
  • Bit_score: 643
  • Evalue 6.70e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas vesicatoria → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2484
ATGCCCATCTCCGACCGGCCACCTTCGGGTGGCCGGTTCGGGCCCCACAACAAGGAGACTCCAGTGCAGTACGAAGATCGCCAGGAAGCGTTGGTTCGCACGTTCGGTGTTGTCGATGCCTATCACGATGATGACGGCATCTTCGTAGTTTCGCCCGACCGCCTCGGGTTCGGCGTAATGGCAAAGCCGATTGCCGGCTTTGACCAGCAGATGGGCGAGGCCCTGAACGCCCTGCTCAATGTCCCCTTTCCGGCTGGGACAATTCTCCAGTTCTGCCTGTACGCATCGCCCGACATTGAAGAAGTGCTGCTGCGCTTCGAGATGATGCGCCAGTACGAAACCGACCCGACCCTGTGCGAGATGACCCGCCAGCGCATCGGCTTCCTGCGTGGCCTCACGCAACGTCCGATCGGCCAGGTCGCCGGCGCACGGCTGCGCCAGATGCGCCTGGTGATCTGCGCCTCGATCAAGGAAGGCGAGAAGGATCCGACGTTCGAGGAAATGACCCGCATCCGCGAGCTGCAGCAGAACTTCGAAGCGGCCCTGAAGACCATCGGGTTCAAGTACGACCGGCTGACCGCGGGCTCCTATGTCCGCTTCATGGAGTCCATCCTCAACCACGGGCCGGAAGCCATCTGGCGGCGTTCCGCGCAGTCGGATCACGAGGAAGGCGAGCTGCTGTGCAACCAGCTCCTGGATCCGGACGTGGCCATCGAGGTGGACGCCGACGAGATCCGGCTTGGCGAGCGTTGCCACGTGCGCATACAGCATCCGAAGCGCTACCCGGACTACCTCTACCCAGGTCTTGCCCAGTACTACATGGGCGACATCATGAAGGGCATGCGCGCGATGCGCGACCCGGTGCTCTACACCGTCAACATCCTGTACCCCGATCACGAGACGCGCCGCAGCGCGCTTCTCCGCGACTTTCAGTGGGCGACCCGTAACGCCGAGGGCAGGCTGGCCCGGTTCGTCCCCGAGTACGCGCACCGTGCCAACAGCCTGCGCATTATGAACGACGCGATCAACAAGGGTGATCGCATCGTGTACGCGTACATCTCCGCCGCGACGTTCTCCGACACGCGAGAGCAGTCGATCCAGGCCGCCACCGCCGTGCAGGGCATGTTCCGCACAGCGGGTTTCCAGACGTTGCCGGATCGCTACGCGCTGCACGCGATGTTTGCCCAGATGATGCCCTTTGCGGCCGAGGAGGACGCCCGGCAGTTCCTCGGCAGCTATCGCACGATGGCGACGTCGCACGTGGTCCCCATGCTCCCGGTGATCGGAAGCTGGGGCGGCAGCTACAACCCCCTGCTCACGCTGATCGCCCGGGACGGCCAGCTCATGCCCTGGTCGCCCTACGACAGCGACAACAACTTCAATATCGTGATCGCGGCGCAGTCCGGCTCCGGCAAGAGCTTCCTGGCCAACAACATCGTATCGAACTTCCTGTCGATCGGTGGTCGCGCCTGGATCATCGACAAGGGCTACTCGTACAAGAAGCTGTGCGAGCAGCAGGGCGGCGAGTACATCGAGTTCACCGACGACACCGATCTCTGCCTCAACCCATTCTCGATCGTGCGGAACTTCGTTGACGAGGTCGAGATCCTGGTGGGCGTGCTGTCCGTGATGGCCGCTCCCAAAGAGGGCTTCAGCGAGTTCCAGCTCCCGGCAGTGATGCGTATCCTCACCGAGCAGTGGGAGCTTCACGGAAAATCGCTCACGATCGACCAGCTCGCCGATGCGTGCCTGGCCGAGGAGGACGACCGCATCCGTGACGTCGGCCACCAGCTCTTCGCGTTCACGACGAAGGGCCAGTACGGCCGCTTCTTCAACGGCGAGTCGAACGTCGACCTGAACAACCGCCTGGTCGTCCTCGAACTGCAACAGTTGTCCGGTCGTGAGCACCTTCAGCGACTCGTGTTGCTGCAGATCATGTATGCGATCCAGCAGTCCATGGACAACCTGCCGCGCGACATGCCGAAGATCATCCTGATCGACGAGGCATGGCAGCTGCTGAGTTCGGGCGAGACCAAGACCTTCATCGTCGGCTGGTATCGCCAGCTCCGAAAGTTCGGCGCCACGGCTGCGATCTGTACGCAGTCGATCAACGACTTCTATGCGTCGGCCGGGTCGGAGGCCATCGTGGAGAACTCCGCGCACAAGCTCCTTCTCGGCCAGAAGAAGGAGTCGATTGCGATGGTCAAGCAGACGGGTCGCCTGCCGATGTCGGACGGTGAATACGCATTGCTCGAGTCGGTACACACCGTGAAGGGCGAGTACTCCGAGATCATGTTCAGCGGCCCGGCGGGAACCGGCGTGGGCAGGCTGGTCGAGTCGGACTTCAACCTGCTGCTCTTCTCCTCTGATGCCCGCGACGTCAGCGCCATCAAGACGTTCACGGATCAGGGCATGAGCACGGTCGAAGCCATCAAGGAAGTGCTGCGCCAGCGCGGTAAGACGAGTGAGGCCAAGGCGGCATGA
PROTEIN sequence
Length: 828
MPISDRPPSGGRFGPHNKETPVQYEDRQEALVRTFGVVDAYHDDDGIFVVSPDRLGFGVMAKPIAGFDQQMGEALNALLNVPFPAGTILQFCLYASPDIEEVLLRFEMMRQYETDPTLCEMTRQRIGFLRGLTQRPIGQVAGARLRQMRLVICASIKEGEKDPTFEEMTRIRELQQNFEAALKTIGFKYDRLTAGSYVRFMESILNHGPEAIWRRSAQSDHEEGELLCNQLLDPDVAIEVDADEIRLGERCHVRIQHPKRYPDYLYPGLAQYYMGDIMKGMRAMRDPVLYTVNILYPDHETRRSALLRDFQWATRNAEGRLARFVPEYAHRANSLRIMNDAINKGDRIVYAYISAATFSDTREQSIQAATAVQGMFRTAGFQTLPDRYALHAMFAQMMPFAAEEDARQFLGSYRTMATSHVVPMLPVIGSWGGSYNPLLTLIARDGQLMPWSPYDSDNNFNIVIAAQSGSGKSFLANNIVSNFLSIGGRAWIIDKGYSYKKLCEQQGGEYIEFTDDTDLCLNPFSIVRNFVDEVEILVGVLSVMAAPKEGFSEFQLPAVMRILTEQWELHGKSLTIDQLADACLAEEDDRIRDVGHQLFAFTTKGQYGRFFNGESNVDLNNRLVVLELQQLSGREHLQRLVLLQIMYAIQQSMDNLPRDMPKIILIDEAWQLLSSGETKTFIVGWYRQLRKFGATAAICTQSINDFYASAGSEAIVENSAHKLLLGQKKESIAMVKQTGRLPMSDGEYALLESVHTVKGEYSEIMFSGPAGTGVGRLVESDFNLLLFSSDARDVSAIKTFTDQGMSTVEAIKEVLRQRGKTSEAKAA*