ggKbase home page

cn_combo_scaffold_6394_2

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(970..2037)

Top 3 Functional Annotations

Value Algorithm Source
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:00 similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 352.0
  • Bit_score: 545
  • Evalue 4.00e-152
methylthioribose-1-phosphate isomerase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FAAED4 similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 353.0
  • Bit_score: 535
  • Evalue 3.00e-149
putative initiation factor 2B_alpha/beta/delta similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 356.0
  • Bit_score: 531
  • Evalue 2.10e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGAACGATTCCGCCATCGATTACGACCGTTACGACCACGTCCGTCCGATCCGTTGGACCGGGGAAACACTGGAGCTGCTGGACCAGCGGGTGCTGCCGTTCACCGTGGTTCACGAGATATGCCGCACCAGCGATGAGGTGGCCGAAGCGATCCGCGCGCTGACCGTGCGTGGCGCGCCCGCCATCGGCATCGCCGCGGCCTGGGGCGTGGTGCTGGCCGGCCGCGGGCTGGAGGCCGGTGATCCGGCCGAAGCCTCGCGCCTGCTTGAGCCCGCCATCCAACGGCTCAACGCTGCCCGTCCCACCGCCGTCAATCTGGCCTGGGCGCTGGCGCGCATGGCCGGCGCGCTGGCCGCGCTGGATCCGGGCGATGATTGGCGCGCGGCGCTGGAGAACGAAGCGCTGGCCATCGAAACCGAAGACCTGGCCGCCAACCGTGCGATGGGGCGCGCCGGCGCCGCGCTGATCGCGCCCGGCAGCGGCGTGCTGACACACTGCAATACCGGCTCGCTGGCGACGGCGGGTTTCGGCACCGCCCTCGGCGTGATCCGCGCCGGCGTGGCCGACGGCCGCATCGCGCGCGTCTTCGCCACCGAGACCCGGCCGTGGAACCAGGGCGCACGGCTGACCGTGTGGGAGCTGGCGCAGGACGGCATCGATGCCACCCTGATCGCCGATGCGGCCGCCTCGCACCTGATGAAGACCGGGCAGGTGCAATGGGTGGTGGTCGGTGCGGACCGCATCTGCGCGAACGGCGATACCGCCAACAAGATCGGGACCTACCAGCTGGCCATCGCGGCGAAGCACCACGGGCTGAAGTTCATGGTGGTGGCGCCGTCTTCCACGGTCGACATGGGAACCGCCTCCGGCGATCTGATCGAGATCGAGGAGCGCGACCCGGCGGAACTGCTGTCGTTCCGCGGCAAGCGCGTGGTGGCGGACGGCGTGCACGCGTGGAACCCCGTGTTCGACGTTGCCCCGCACGAACTGATCGACGCCATCGTCACCGAGAAGGGCGTGGTGGAGCGTCCTGACGCGGCACGCATGCGGACGATGTTCGGCAGCTGA
PROTEIN sequence
Length: 356
MNDSAIDYDRYDHVRPIRWTGETLELLDQRVLPFTVVHEICRTSDEVAEAIRALTVRGAPAIGIAAAWGVVLAGRGLEAGDPAEASRLLEPAIQRLNAARPTAVNLAWALARMAGALAALDPGDDWRAALENEALAIETEDLAANRAMGRAGAALIAPGSGVLTHCNTGSLATAGFGTALGVIRAGVADGRIARVFATETRPWNQGARLTVWELAQDGIDATLIADAAASHLMKTGQVQWVVVGADRICANGDTANKIGTYQLAIAAKHHGLKFMVVAPSSTVDMGTASGDLIEIEERDPAELLSFRGKRVVADGVHAWNPVFDVAPHELIDAIVTEKGVVERPDAARMRTMFGS*