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cn_combo_scaffold_6664_8

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(7718..9121)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus biogenesis protein PilQ n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TI19_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 473.0
  • Bit_score: 602
  • Evalue 4.50e-169
Type IV pilus biogenesis protein PilQ {ECO:0000313|EMBL:EMI48739.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotro similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 473.0
  • Bit_score: 602
  • Evalue 6.30e-169
pilQ; type IV pilus biogenesis protein PilQ similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 473.0
  • Bit_score: 597
  • Evalue 3.10e-168

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ACGTTCAACTTCCAGGACGTGCCTGTGCGCACCGTCCTGCAGTTGATCGCCGACGAGTCCAACCTCAACATCGTCGCCGCCGACACCGTGCAGGGCAACGTCACCCTGCGTCTGGTCAACGTGCCGTGGGACCAGGCGCTCGACCTGGTGCTGCAGGCCAAGTCGCTGGACAAGCGGCGCAGCGGCAACGTGGTGTGGGTGGCTCCGCAGAAGGAAATCGCCGACTTCGAGCAGGCCAAGGAAGATGCCCGCATCAACCTGGAGGAGCGCGCCGAGAAGGTGACCGAGTACATCCCGGTCAACTACGCCAACGCCGAGGACATCGCCCGCCTGCTGACCGAGGAAAGCAAGGGCAACCAGCAGGGCGGTGGCCAGAGCGGCGGGCAGAGCGCGCAGGATCGCGGCTTCCTGTCCGGCCGCGGCAGCATCAGCTTCGACAAGCGCACCAATACCCTGCTGGTGATCGACATTCCGCAGCGCGTGGCCAACATCAGGGACCTTGTGCAGAAGCTCGACAAGCCGGTCGACCAGGTGGTGATCGAGGCCCGCATCGTGATCGCCAACGAGAACGTGGCGCGCGAGCTGGGTGCGAAGTTCGGCATTAGCGGGGCCAAGGACAACGCCTACTTCAGCGGCGATCTCGCAACAAACACGGAAAACCGCAAGGATGACGTCGCCACTGCGACTGCCAACGCCAATGCGGTTCGTCAGTGGCAGATCGAGAACCAGAACCGTGCTGCGGAGGGCAAGGCGCCGCTGCCTCCGCCGGTGCTCAGCGGCGGCACCATTACTCGTGGGCTTATGAGCAATCTGCCCGCAGTCCTGACCGGCACCAACCCGGGTTCGCTGGCGCTGTCCATCCTCAATGCCGGCTACCTGCTGGACGTCGAGTTGTCCGCGGTCCAGACCCAAGGGCGTGGCGAGGTGATTTCCAACCCGCGCATCGTCACCAGCAACCAGAAGGAAGCGGTGATCCGGCAGGGCAAGGAAATCGGCTATCTCACGGTGACCGGTGCGGGTGGCCAGCTCACCCCGACCGTCGCGTTCAAGGAAGCCTTGCTGGAACTGAAGGTGACCCCGACCATCACCAACGATGGCCGCGTGTTCCTCAACCTGGCGGTGAAGAAGGACGAGCTGGACGGGTTCGTGGACATGGGGACCTTCGGCGAAGTGCCGCAGATCGCCAAGCGCGAAGTCAACACGGCGGTGCTGGTGGAAGACGGCCAGACCGTGGTGATCGGCGGCGTCTACGAGTTCAGCGACACCTCCGAAATCACCAAGGTGCCGTTCCTCGGCGACATCCCGCTGCTCGGCAACCTGTTCCGCAACAAGAACCGCAGCAAGAGCAAGGCCGAGCTGCTGGTGTTCGTGACGCCGAAGGTCATGCGCGTCGCCCAGCACTGA
PROTEIN sequence
Length: 468
TFNFQDVPVRTVLQLIADESNLNIVAADTVQGNVTLRLVNVPWDQALDLVLQAKSLDKRRSGNVVWVAPQKEIADFEQAKEDARINLEERAEKVTEYIPVNYANAEDIARLLTEESKGNQQGGGQSGGQSAQDRGFLSGRGSISFDKRTNTLLVIDIPQRVANIRDLVQKLDKPVDQVVIEARIVIANENVARELGAKFGISGAKDNAYFSGDLATNTENRKDDVATATANANAVRQWQIENQNRAAEGKAPLPPPVLSGGTITRGLMSNLPAVLTGTNPGSLALSILNAGYLLDVELSAVQTQGRGEVISNPRIVTSNQKEAVIRQGKEIGYLTVTGAGGQLTPTVAFKEALLELKVTPTITNDGRVFLNLAVKKDELDGFVDMGTFGEVPQIAKREVNTAVLVEDGQTVVIGGVYEFSDTSEITKVPFLGDIPLLGNLFRNKNRSKSKAELLVFVTPKVMRVAQH*