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cn_combo_scaffold_7121_9

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 7368..8579

Top 3 Functional Annotations

Value Algorithm Source
RNA helicase n=1 Tax=Xanthomonas axonopodis RepID=UPI0002D8832F similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 399.0
  • Bit_score: 536
  • Evalue 2.00e-149
RNA helicase {ECO:0000313|EMBL:EYR67091.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 400.0
  • Bit_score: 576
  • Evalue 4.20e-161
dbpA; ATP-dependent RNA helicase DbpA similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 399.0
  • Bit_score: 535
  • Evalue 1.60e-149

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGACCACGCCCGCCACTTTCGCCGACCTCGCCCTGGCGCCCGCGCTGCGCCCCGGCCTCGACGCGCTCGACTACACCACCCTCACCCCCATCCAGGCGCAGGCGCTGCCCGCCATCCTCGACGGCCGCGACCTGGTCGCGCAGGCGCCCACCGGCAGCGGCAAGACCGCCGCGTTCGGGCTGGGCCTGCTCCAGCGGATCGACCCCACGGCCGGCGGCACCCAGGCGCTGGTGCTCTGTCCCACCCGCGAGCTGGCCGACCAGGTCGGCAAGCAGCTGCGCAAGCTGGCCACCGGCCTGGCCAACCTGAAGCTGTCGGTCCTGTGCGGCGGCATCCCGCTGGCGCCGCAGCTGGCCTCGCTGGCGCATGCGCCGCAGGTGGTGGTGAGCACGCCGGGGCGGGTGCTGGAGCTGGTGCAGAAGGACGCGCTGGACCTGCGCGGCGTGCGCGTGCTGGTGCTGGACGAGGCCGACCGCATGCTGGACATGGGCTTCGACGAGCCCATCCGCGCGCTGGTGAAGCGCACGCCGAAGGACCGGCAGGGCCTGCTGTTCTCGGCCACCTTCCCCGACGCCATCCGCACGCTGGCCACCGCGATGCTGCGCGACCCGCTGGAAGTCAGCGTGGACGGCGGCGCCCAGCCATCCACCATCGAGACGCATTTCTTCGAGGCCGAATCCGCCCGCCGCGCGCCCCAGCTGGCGGCGCTGCTGCTGCAGTTCAACCCGGACTCCACCGTGGTGTTCTGCAACATGCGCAAGGACACCGAGGAAGTGGTGGGTTCGCTGGCCCACTACGGCTTCACCGCGCTGGCGCTGCACGGCGACATGGAACAGCGCGACCGCGAGGAAGTGCTGGTGCGCTTTGCCAACCGCAGCTGCAACGTGCTGGTGGCCAGCGACGTGGCCGCGCGCGGGCTGGACATCGACGACATCGGCGCGGTGGTGAACTTCGAGCTGCCCACGGATGCCGACACCTACCTGCACCGCATCGGCCGCACCGGCCGCGCCGGCCGCCGCGGGCTGGCCTTGAGCCTGGTCGCGCCGGGCGAGCGCAACCGCGCGGTATTGATCGAGGAACGCCAGGGACATCCGCTCCGCTTCGAACGCATCGCCGCGCTGGAAGGCAAGCCGCGCGGCGTGCCGCAGGCGGCGATGGCGACGCTGCGCATCGACGCCGGCCGCACCGACAAGCTGCGCCCCGGCGACATC
PROTEIN sequence
Length: 404
MTTPATFADLALAPALRPGLDALDYTTLTPIQAQALPAILDGRDLVAQAPTGSGKTAAFGLGLLQRIDPTAGGTQALVLCPTRELADQVGKQLRKLATGLANLKLSVLCGGIPLAPQLASLAHAPQVVVSTPGRVLELVQKDALDLRGVRVLVLDEADRMLDMGFDEPIRALVKRTPKDRQGLLFSATFPDAIRTLATAMLRDPLEVSVDGGAQPSTIETHFFEAESARRAPQLAALLLQFNPDSTVVFCNMRKDTEEVVGSLAHYGFTALALHGDMEQRDREEVLVRFANRSCNVLVASDVAARGLDIDDIGAVVNFELPTDADTYLHRIGRTGRAGRRGLALSLVAPGERNRAVLIEERQGHPLRFERIAALEGKPRGVPQAAMATLRIDAGRTDKLRPGDI