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cn_combo_scaffold_7262_1

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 1..1929

Top 3 Functional Annotations

Value Algorithm Source
Type-IV secretion system protein TraC n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B9P2_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 634.0
  • Bit_score: 691
  • Evalue 5.90e-196
Uncharacterized protein {ECO:0000313|EMBL:KHD60335.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonop similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 634.0
  • Bit_score: 695
  • Evalue 9.80e-197
plasmid pilus assembly protein similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 634.0
  • Bit_score: 550
  • Evalue 7.80e-154

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Taxonomy

Xanthomonas axonopodis → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1929
GGGTTCAAGTACGACCGGCTAACCGCAGGCTCCTACGTCCGTTTCATGGAGTCCATCCTCAACCAAGGGCCGGAAGCCATCTGGCGGCGTTCCGCGCAGTCGGATCACGAAGAAGGCGAGTTGCTGTGCAACCAGCTGCTGGATCCGGATGTGGCCATCGAGGTTGACGCCGACGAGATCCGGCTTGGCGACCATTGCCACGTGCGCATCCAGCATCCGAAGCGCTACCCGGACTACCTCTACCCAGGTCTGGCCCAGTACTACATGGGCGACATCATGAAGGGCATGCGCGCAATGCGCGACCCGGTGCTCTACACGGTCAACATCCTGTACCCCGATCACGAGACGCGCCGCAGTGCGCTTCTCCGCGACTTCCAGTGGGCGACCCGCAACGCCGAAGGGCGGCTGGCCCGGTTCGTCCCCGAATACGCGCAGCGTGCCAACAGCCTGCGCATCATGAACGACGCGATCAACAAGGGTGACCGCATCGTCTACGCGTACATCTCCGCCGCGACGTTCTCTGACACACGCGAGCAGTCGATCCAGGCCGCCACTGCCGTCCAAGGCATGTTCCGCACAGCGGGTTTTCAGACGTTGCCGGATCGCTATGCGCTGCACGCGATGTTCGCGCAGATGATGCCCTTTGCGGCCGAGGAAGACGCGCGTCAGTTCCTCGGCAGCTATCGCACCATGGCGACGTCGCACGTGGTCCCGATGCTCCCGGTGATCGGTAGCTGGGGCGGCAGCTACAACCCGTTGCTCACGCTGATCGCCCGCGACGGCCAGCTCATGCCTTGGTCGCCCTACGACAGCGACAACAATTTCAATATCGTGATCGCGGCGCAGTCGGGCTCCGGTAAGAGCTTCTTGGCCAACAACATCGTTTCCAATTTCCTGTCGATCGGCGGCCGCGCCTGGATCATCGACAAGGGCTACTCGTACAAGAAGCTGTGCGAGCAGCAGGGTGGCGAGTACATCGAGTTCACCGACGACACCGATCTCTGCCTCAACCCGTTCTCGATCGTGCGGAACTTCGTTGACGAGGTTGAGATCCTCGTGGGTGTGCTGTCCGTCATGGCCGCTCCCAAGGAGGGCTTCAGCGAGTTCCAGCTTCCCGCTGTGATGCGTATCCTCACCGAACAGTGGGATATCCACGGGAAGAAGTTGACTATCGATCAGCTCGCGGACGCCTGCCTCGCGGAGGACGACGACCGCATCCGCGACGTTGGCCACCAGCTGTTCGCGTTCACCACCAAGGGTCAGTACGGTCGCTTCTTCAACGGCGAGTCAAATGTCGACCTAAACAACCGCCTGGTCGTGCTCGAGCTGCAGCAGCTGTCCGGCCGCGAGCACCTCCAGCGTCTCGTGCTGCTGCAGATCATGTATGCGATCCAGCAGTCGATGGACAATCTCCCGCGCGACATGCCCAAGATCATTCTGATCGACGAGGCGTGGCAGTTGCTGAGTTCGGGGGAGACCAAGACCTTCATTGTCGGCTGGTACCGCCAGCTGCGAAAGTTCGGCGCTACGGCTGCGATCTGTACGCAGTCGATCAACGACTTCTACGCCTCGGCTGGTTCGGAGGCGATCGTGGAAAACTCGGCGCACAAGCTCCTTCTTGGTCAGAAGAAAGAGTCGATCCAGATGGTCAAGCAGACGGGCCGCCTTCCGATGTCCGATGGCGAGTATGCGCTGCTCGAGTCGGTGCACACCGTGAAGGGCGAGTACTCAGAGATCATGTTCAGCGGCCCAGCCGGCACAGGCGTCGGGCGCCTCGTCGAGTCGGACTTCAACCTTCTCCTTTTCTCCTCCGATGCGCGCGACGTCAGCGCCATCAAGGCGTTCACGGATCAGGGGATGAGCACGGTCGAAGCCATCAAGGAAGTGCTCCGCCAGCGCGGTAAGTCGAGCGAGGCCAAAGCGGCATGA
PROTEIN sequence
Length: 643
GFKYDRLTAGSYVRFMESILNQGPEAIWRRSAQSDHEEGELLCNQLLDPDVAIEVDADEIRLGDHCHVRIQHPKRYPDYLYPGLAQYYMGDIMKGMRAMRDPVLYTVNILYPDHETRRSALLRDFQWATRNAEGRLARFVPEYAQRANSLRIMNDAINKGDRIVYAYISAATFSDTREQSIQAATAVQGMFRTAGFQTLPDRYALHAMFAQMMPFAAEEDARQFLGSYRTMATSHVVPMLPVIGSWGGSYNPLLTLIARDGQLMPWSPYDSDNNFNIVIAAQSGSGKSFLANNIVSNFLSIGGRAWIIDKGYSYKKLCEQQGGEYIEFTDDTDLCLNPFSIVRNFVDEVEILVGVLSVMAAPKEGFSEFQLPAVMRILTEQWDIHGKKLTIDQLADACLAEDDDRIRDVGHQLFAFTTKGQYGRFFNGESNVDLNNRLVVLELQQLSGREHLQRLVLLQIMYAIQQSMDNLPRDMPKIILIDEAWQLLSSGETKTFIVGWYRQLRKFGATAAICTQSINDFYASAGSEAIVENSAHKLLLGQKKESIQMVKQTGRLPMSDGEYALLESVHTVKGEYSEIMFSGPAGTGVGRLVESDFNLLLFSSDARDVSAIKAFTDQGMSTVEAIKEVLRQRGKSSEAKAA*