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cn_combo_scaffold_7688_5

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(4868..5347)

Top 3 Functional Annotations

Value Algorithm Source
rod shape-determining protein MreD n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B3E8F1 similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 159.0
  • Bit_score: 238
  • Evalue 5.80e-60
mreD; rod shape-determining protein similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 157.0
  • Bit_score: 237
  • Evalue 3.60e-60
Rod shape-determining protein MreD {ECO:0000313|EMBL:AKC86468.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 160.0
  • Bit_score: 237
  • Evalue 1.40e-59

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAGCCGCGCGCGCAACGGCTGGGTGCTGCCGGTCAGCCTGCTGCTGGCGCTGTTGCTGGGTCTGGTGCCCCTGCCCGGCGCGCTGCAGGCGCTGCGGCCGTACTGGCTGGCGCTGGTGCTGGCGTACTGGCTGCTGGAAACCCCGGACCGGGTTGGGCTGGGCACGGCGTTCGTGCTGGGCCTGCTGGCCGATCTCGCGTTCGGCGGGTTGCTGGGCGAACAGTCGCTGCGGCTGGTGGTGCTGGCGTTCATCCTCGAGCGCTTCCGCGCACGGCTGCGCTTCTTCCCGGTTTCGCAGCAGGCGCTGACCATCGGCGTGCTGTTGCTCAACGACCGCGTCATCAGCGCCGGCCTGCACCTGCTGACCGGCGTGCCGCAGCTGCCGTGGCTGTACTGGGCGGCGCCGCTGGCCGGGATGTTACTGTGGCCGCCGCTGCACCTGCTGCTCGATTTCCTGCGGCTGCGCCGGCCCGGCTGA
PROTEIN sequence
Length: 160
MSRARNGWVLPVSLLLALLLGLVPLPGALQALRPYWLALVLAYWLLETPDRVGLGTAFVLGLLADLAFGGLLGEQSLRLVVLAFILERFRARLRFFPVSQQALTIGVLLLNDRVISAGLHLLTGVPQLPWLYWAAPLAGMLLWPPLHLLLDFLRLRRPG*