ggKbase home page

cn_combo_scaffold_7721_4

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 3825..4427

Top 3 Functional Annotations

Value Algorithm Source
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 209.0
  • Bit_score: 261
  • Evalue 8.60e-67
chemotaxis protein CheD n=1 Tax=Xanthomonas RepID=UPI0003775387 similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 186.0
  • Bit_score: 220
  • Evalue 1.20e-54
cheD; chemotaxis protein ched similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 186.0
  • Bit_score: 220
  • Evalue 3.40e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGAGCGGCCTGCCGGCCAGCACCACCGCGGCCCGGACACCGCCCCCGGGCACCTACTACGACCCGGCGCTGGATGCCGACGTGATCAAGCTGCTGCCGGCCGAATGGCGGGTCTCGTCCGAGCCGATCGCACTGGCCACCGTGCTCGGCTCCTGCGTGGCGGCCTGCCTCTACGACGCCAGCGCGAAGGTGGGCGGGATGAACCATTTCATGCTGCCCGACGCCGCACCCGGCGACGGCAGCGCGCGCTACGGGGCCCACGCGATGGAACTGCTGATCAACGGGCTGCTCAAGCACGGCGCGGTGCGCTCGCGCCTGCAGGCCAAGGTATTCGGCGGCGGCAACGTGCTGCCGGGGATGACGCTGGACCCGATCGGCACCCGCAACGGCAATTTCGTGCTCAACTACCTCAGCGCGGAGCGCATCCCGATCGTGGCCCAGGACCTGTTCGGGGTGCAGCCGCGCAAGGTCTGTTTCTTCGTGCGCACCGGCCGCACCCTGGTCAAGCGCCTGCCCGCGGCAGGCGAGATCGCGCGGGTCGAGCGCGCCTATCGCAGCCAGCTGGCGCAGAAGCCGGTGGCCGGTTCCGTGGAGCTGTTCTGA
PROTEIN sequence
Length: 201
MSGLPASTTAARTPPPGTYYDPALDADVIKLLPAEWRVSSEPIALATVLGSCVAACLYDASAKVGGMNHFMLPDAAPGDGSARYGAHAMELLINGLLKHGAVRSRLQAKVFGGGNVLPGMTLDPIGTRNGNFVLNYLSAERIPIVAQDLFGVQPRKVCFFVRTGRTLVKRLPAAGEIARVERAYRSQLAQKPVAGSVELF*