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cn_combo_scaffold_8098_1

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 2..313

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Rhodanobacter sp. 115 RepID=I4VLZ9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 102.0
  • Bit_score: 157
  • Evalue 8.40e-36
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteob similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 100.0
  • Bit_score: 158
  • Evalue 4.00e-36
transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 100.0
  • Bit_score: 152
  • Evalue 5.80e-35

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
GAGATCGACCGCCGCGTGCGCTACCTCAGCAAGCGGCTCGAAGTGCTGAAGGTGGTGGACGCCGCACCGTCCGACCGCGCGGCGGTGTTCTTCGGCGCCGAAGTGGAGCTGGAGAACATCGCCAGCGGCGAGCTGGTGCGCTACCGCATCGTCGGCCCGGACGAGACCGACGCCAGGCTGGGCTGGGTCAGCATCGACGCACCGCTGGCGCGGGCGATGCTGAAGAAGCGGGTGGACGACGAGTTCGAAGCGCCGCTGCCGGGCGGCACCGTGCGTTACGCGATCATCGAAGTGGCCTACCCGTCCGCGTAG
PROTEIN sequence
Length: 104
EIDRRVRYLSKRLEVLKVVDAAPSDRAAVFFGAEVELENIASGELVRYRIVGPDETDARLGWVSIDAPLARAMLKKRVDDEFEAPLPGGTVRYAIIEVAYPSA*