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cn_combo_scaffold_8098_9

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 7160..7678

Top 3 Functional Annotations

Value Algorithm Source
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="L similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 174.0
  • Bit_score: 266
  • Evalue 2.30e-68
Transcription factor jumonji, JmjC id=3023002 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 177.0
  • Bit_score: 230
  • Evalue 1.70e-57
potF; putrescine ABC transporter periplasmic putrescine-binding protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 169.0
  • Bit_score: 198
  • Evalue 1.20e-48

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
GTGACCCTGCGCCTTGCCCCCCTTGCCTGCGCCGTGCTGCTGCTCACCGCCTGCGGCGGCAAGCCCGATGCCGCGGACGCTTCCAGCGCCACGCCGGCCGGCCCGGAAGAGAAGATCCTCAACGTCTACAACTGGTCCGACTACGTGGCCGAGGACACCATCGCCAACTTCGAGAAGGCGACCGGCATCGAGGTCAACTACGACGTCTATTCCGAGAACGAGACGCTGGAGACCAAGCTGACCGCCGGCAGCAGCGGCTACGACGTGGTGTTCCCGTCGGCGCGCCCGTTCGCGCAGCGCCAGATCAAGGCCGGCCTGTACCTCCCATTGGACAAGGCGAAGCTGCCGAACCTCGCGCACCTCGATCCGGCCATCCTGCAGGGCCTGGCCGACATCGACCCCGGCAACGCCTACGTGGTGCCGTACATGTGGGGCACCACGGGCCTGGGCATCAACGTGGACAAGGTGAAGGCGGCGCTGGGCGAGAACGCGCCCATCGATTCCTGGAACCTGCTGTTC
PROTEIN sequence
Length: 173
VTLRLAPLACAVLLLTACGGKPDAADASSATPAGPEEKILNVYNWSDYVAEDTIANFEKATGIEVNYDVYSENETLETKLTAGSSGYDVVFPSARPFAQRQIKAGLYLPLDKAKLPNLAHLDPAILQGLADIDPGNAYVVPYMWGTTGLGINVDKVKAALGENAPIDSWNLLF