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cn_combo_scaffold_8253_1

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 79..1044

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase (EC:3.2.1.17) similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 325.0
  • Bit_score: 500
  • Evalue 4.60e-139
23S rRNA pseudouridylate synthase C n=1 Tax=Xanthomonas arboricola RepID=UPI0002D51F74 similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 328.0
  • Bit_score: 501
  • Evalue 5.60e-139
Ribosomal large subunit pseudouridine synthase C {ECO:0000313|EMBL:KGQ18982.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 322.0
  • Bit_score: 514
  • Evalue 9.00e-143

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGACACAGCCGGATACCCCCACCAGCGGCGGCGCGCGCACCGTGCGCGTGCCCGATGATCGCGCCGGGCAGCGGCTGGACAATTTCCTGCTGGGTCAGCTCAAGGGCGCTCCGCGCAGCCTGGTCTACAAGCTGGTGCGCAGCGGGCAGGTGCGGATCAACGGCGGCCGGGCCAAAGCCGAGCGCAAGCTGGAGGCGGGGGATGAGGTGAGAATCCCGCCTGTTCGTATCGAATCGCCGCAGGATGCCGGACGTTTGCCGCCGAAAGGGTTGCTGGCGGCGCTCGAGGCATCGATCGTGTTCGAGGACGCCCGCCTGCTGGCCATCAACAAGCCCTCCGGCATCGCCAGTCACGGCGGCAGCGGCATCTCCTTCGGCGTGATCGAGGCGATGCGCGCCCTGCGTCCGCGCGACACGCTGGAACTGGTGCACCGGCTGGACCGCGACACCTCGGGCCTGCTGGTGCTGTCCAAGAAGCGCTCGGCCTTGTCGGAACTGCAGCGATTGTTGCGGGAAGATCACGGATCTGGCATCGAAAAACGCTATCTGGCGCTGCTGGTCGGGCGCATGCCCGGCGGCACCATGAGTGTGGACGCGGCGCTGCACGTCGGCCTGCGCCAGGGCGGCGAGCGGCATGTGCAGGTGAATCCGGCCGGCAAGCCGTCGATGAGCCATTTCCGCATGCTGGAGCGGCGTGGCGGCCAGAGCTACTGCGAAGTCCGCATCGAAACCGGTCGCACCCACCAGATCCGCGTGCACGCCCAGCACATCGGCCACCCGGTGGCCGGCGACGACAAGTACGGCGACGCGGCGGCCACCAAGCGGCTGCGTGAGCAGGTGGGGCTGAAGCGGCTGTTCCTGCACGCCTCCACGCTGGAATTCGCGCTCGACGCCGGCAAGACGCCGTATTCGCTCAACGCCCCGCTGGTGCCGGAGTTGATCGAGGTCTTGGACCGGCTGGGTTAG
PROTEIN sequence
Length: 322
MTQPDTPTSGGARTVRVPDDRAGQRLDNFLLGQLKGAPRSLVYKLVRSGQVRINGGRAKAERKLEAGDEVRIPPVRIESPQDAGRLPPKGLLAALEASIVFEDARLLAINKPSGIASHGGSGISFGVIEAMRALRPRDTLELVHRLDRDTSGLLVLSKKRSALSELQRLLREDHGSGIEKRYLALLVGRMPGGTMSVDAALHVGLRQGGERHVQVNPAGKPSMSHFRMLERRGGQSYCEVRIETGRTHQIRVHAQHIGHPVAGDDKYGDAAATKRLREQVGLKRLFLHASTLEFALDAGKTPYSLNAPLVPELIEVLDRLG*