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cn_combo_scaffold_8485_8

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(6522..7355)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 279.0
  • Bit_score: 367
  • Evalue 1.50e-98
shikimate 5-dehydrogenase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B72744 similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 283.0
  • Bit_score: 342
  • Evalue 2.90e-91
aroE; shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 283.0
  • Bit_score: 338
  • Evalue 2.00e-90

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGCAACGCTACGCCGTTTTCGGATCACCCATCAGCCACTCGCAGTCGCCGCGCATCCATGCCGCGTTTGCGAGGCAATGCGGCATTGCGATGGAGTACGTCGCCATCGAGGCCGGCCACGCCGACTTCGCCTCGAAGCTCGCCGCCAGCGAGGTGCGCGGCGCCAACGTCACCCTGCCGCTGAAGGAAGACGCGTTCGCGCTGTGCATGGGCAATGCCAGCACCCGCGCGCAGCGCGCCGGCGCGGCCAATACCCTGATCCGCGACGGCCACGGCTGGCGTGGCGACAACACCGACGGCAGCGGGCTGGTGCGCGACCTGACCGAGCGCCACGGCCTGGACCTGCGCGAGCGCCGCGTGCTGCTGCTGGGCGCCGGCGGCGCCGCACGCGGGGTGGCGCCCGCCCTGCTGGATGCCGGCGTCCACTCGCTCTACGTGGCCAACCGCACGCCGGCACGCAGCGAGGCGCTGGCGGATGCGCTGGGCGAGCCCGGCCGCGTCCATCCGCGCAGCCTTGACGACCTTGACCGGCTGGGCGAATTCGACCTGCTCATCAATGCCACCTCCGCCACCCGCGGCGGCACCCTGCCGGCGCTGCCGATGTCGCTGGCCGGCCAGCGCAGCGTGGCGGTGGACCTGAGCTATGGCGAGGCGGCGGTGGCGTTCCTGGCCTGGGCCCGCGCCGCCGGCTGCACGCAGGCGCTGGACGGGCTCGGCATGCTGGTGGAGCAGGCCGCGGAGAGCTTCCTGCTCTGGCACGGCGTGCGCCCGGAAACCGAAGCGGTGTATGCCGAGCTGCGTGCCCGCAACGATGCGCTGGTCACCGGCGACTAG
PROTEIN sequence
Length: 278
MQRYAVFGSPISHSQSPRIHAAFARQCGIAMEYVAIEAGHADFASKLAASEVRGANVTLPLKEDAFALCMGNASTRAQRAGAANTLIRDGHGWRGDNTDGSGLVRDLTERHGLDLRERRVLLLGAGGAARGVAPALLDAGVHSLYVANRTPARSEALADALGEPGRVHPRSLDDLDRLGEFDLLINATSATRGGTLPALPMSLAGQRSVAVDLSYGEAAVAFLAWARAAGCTQALDGLGMLVEQAAESFLLWHGVRPETEAVYAELRARNDALVTGD*