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cn_combo_scaffold_8588_3

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 2777..3745

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , LysR family protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XGF7_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 317.0
  • Bit_score: 505
  • Evalue 5.10e-140
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGQ20161.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 321.0
  • Bit_score: 516
  • Evalue 3.10e-143
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 317.0
  • Bit_score: 503
  • Evalue 4.20e-140

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGCCGAAAAGCCCCGCCCCAGCGCTGCGTTTCGCCTACAAGGGCTCGCGCCTGAAGCCATTGCGGGCGTTCTGCCAGGTGGCGCGGCTGGGCTCGATCTCGCGCGCTGCCGAGGCGCTGTACCTCAGCCAGCCGGCAGTGACCCTGCAGTTGCAGGCGCTGGAGCGCGAACTGGGGGTGCGGCTGCTGGAACGCGTCGGCCGCCGCCTGGTTCCCACGCGCGAGGGCGACCTGCTGTACGAAATGGCACGCCCACTGGTGGAGGGGCTGGACAACCTGGCCGCCAGCTTCCGCGAGCAGGTGCGCGGACTGGACGCCGGCGAGCTGAACGTGGCCGCCGGCAGCTCCACCATCCTGTACCTGCTGCCGGGCATCGTCGATGCGTTCCGCCAGCGCCACCCGGACGTGCGCCTGAGCCTGCACAACGTCACCGGCGCCAGCGGCCTGGACCTGCTGCGCAGCGATGCCGTGGACCTGGCCGTGGGCTCGATGCTGGACGTGCCGGCCGACCTGACCTACGCGCCGGTGTACCGCTTCGAGCCGATGCTGATCACCCCGCCCGACCACCCGCTGGCAAGCAAGCGCGAGTTGTCACTGGAGGACCTGTCGCCTTACGGGCTGATCCTGCCGCCCAAGCGCCTGACCACCTACCGGCTGGTCGACCTGGTGTTCCAGCAGAACCGGGTGCCGTACACGGTTGCACTGGAAGTGGGCGGCTGGGAGGTCATCAAGCAGTACGTGGCGATGGGCCTGGGCATCAGCATTGTCACCGCGATCTGCCTGACCGAGGCCGACCGCCAGCGGCTGGCGGCACGCTCGCTGGCGCGCTGGTTCCCGTCGCGCAGCTACGGCATCGTGATGCGCAAGGGCAAGTTCCTGTCAGCGCAGGCCCGCGCCTTCGTCGAGCTGATCCAACCGGAGGTGCTCACGCCGCGCGGCTACGACGAGAGCGGGCATTCGGAGCGCTGA
PROTEIN sequence
Length: 323
MPKSPAPALRFAYKGSRLKPLRAFCQVARLGSISRAAEALYLSQPAVTLQLQALERELGVRLLERVGRRLVPTREGDLLYEMARPLVEGLDNLAASFREQVRGLDAGELNVAAGSSTILYLLPGIVDAFRQRHPDVRLSLHNVTGASGLDLLRSDAVDLAVGSMLDVPADLTYAPVYRFEPMLITPPDHPLASKRELSLEDLSPYGLILPPKRLTTYRLVDLVFQQNRVPYTVALEVGGWEVIKQYVAMGLGISIVTAICLTEADRQRLAARSLARWFPSRSYGIVMRKGKFLSAQARAFVELIQPEVLTPRGYDESGHSER*