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cn_combo_scaffold_9143_4

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 4355..5038

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Xanthomonas sacchari RepID=UPI000262AA26 similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 225.0
  • Bit_score: 405
  • Evalue 3.90e-110
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:KGQ18685.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lys similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 227.0
  • Bit_score: 414
  • Evalue 1.20e-112
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 225.0
  • Bit_score: 405
  • Evalue 1.10e-110

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCGCATTCTGGTCATCGAGGACAACCCCGACATCGCCGCCAACCTGGGCGACTACCTTGAGGACTGCGGTCACACGGTGGATTTCGCCGCCGACGGCATCACCGGGCTGCACCTGGCGGTGGTGCACGAGTTCGACGCGATCGTGCTGGACCTCAACCTGCCGGGCATGGACGGGCTGGAGGTCTGCCGCAAGCTGCGCGTGGATGCGCGCAAGCAGACCCCGGTGTTGATGCTGACCGCGCGCGACTCGCTGGACAACAAGCTGGCCGGCTTCGATTCCGGTGCCGACGACTACCTGATCAAGCCGTTCGCGCTGCAGGAAGTGAACGTGCGCCTGAACGCGCTGGCGCGGCGCGGCCGCGGTCTGCCGGCGCGGGTGCTCAACGTGGGCGATCTGGAATACAACCTCGACACGCTGGAAGTGCATCGCGAGGGCAAGCTGATCCAGCTCAATCCCACCGCGCTGAAGATCCTGCAGGCGCTGATGGAGGCCTCGCCGGCGGTGGTCACCCGGCAGGACCTGGAGAGCCGGGTCTGGGGCGAGGAGCTGCCGGATTCGGATTCGCTGCGGGTGCACATCCACGGCCTGCGCGCGGCGGTGGACAAGCCGTTCGGCAAGCCGATGATCCAGACCCGCCACGGCATCGGCTACAGGATCGCCGCGCCCGATGCCGACAGCTGA
PROTEIN sequence
Length: 228
MRILVIEDNPDIAANLGDYLEDCGHTVDFAADGITGLHLAVVHEFDAIVLDLNLPGMDGLEVCRKLRVDARKQTPVLMLTARDSLDNKLAGFDSGADDYLIKPFALQEVNVRLNALARRGRGLPARVLNVGDLEYNLDTLEVHREGKLIQLNPTALKILQALMEASPAVVTRQDLESRVWGEELPDSDSLRVHIHGLRAAVDKPFGKPMIQTRHGIGYRIAAPDADS*