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cn_combo_scaffold_9442_11

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(8335..9369)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 337.0
  • Bit_score: 492
  • Evalue 5.10e-136
tRNA pseudouridine synthase D n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GCW9_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 346.0
  • Bit_score: 464
  • Evalue 8.20e-128
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 337.0
  • Bit_score: 459
  • Evalue 9.70e-127

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
GTGACGGCGCCTGCGCGCGCCCACGGTGCGCCGGTGCTGGCCGCGCGCATACGCAGCACGCCGGAAGATTTCTTCGTCGAGGAGCTGCCGGGTTTCGAGCCCAGCGGCGCCGGCGAGCATCTGCTGCTGACCATCGAGAAGCGCGGCATGAACACCGCGTTCGCCGCCAAGACCATCGCGCAGTGGGCGGGCGTGGACGAGTCTGCCATCGGCTACGCCGGCCTGAAGGATCGCCATGCGGTGACCCGCCAGCGGTTCTCGGTGTGGATTCCGAAGAAGATCGCGCCCGATCTCGCCGCCCTGCAGTCGGATGCGCTGCGGGTGCTCGACCACGCCTGGCATGCGCGCAAGCTGCCGCGCGGCGCGCTGGCGGGCAACCGCTTCGTGCTGGTGCTGCGCGAGCTGGAAGGCCAGCGCGAAGCCGTCGATGCGCGGCTGTCCGCGATCGCGCGGCGCGGCGTGCCCAACCATTTCGGCGAGCAGCGCTTCGGCCGCGGCGGCGACAACGTGCGCAAGGCGGTGGCGATGTTCGCCGGGGGCAGGGTCAAGCGCGAGGAGCGCACGATGCTGCTCTCGGCCGCGCGTTCGGAGCTGTTCAACCGGGTGCTGGCGGCGCGGGTCGAAGCGGGGAACTGGGATGCGGCGCTGGACGGCGAGGTGTGGATGCTGGACGGCAGCCGCAGCGTGTTCGGGCCGGAAGCGATGTCGCCGGACTTGCAGGCGCGGCTGGCCGCGTTCGACATCCATCCCACCGGGCCGTTGTGGGGCGAGGGCGAACTGCGCAGCGCGGACGTGGCGCGCGAGGTGGAACTTGCGGCCGTGCAGGGCGATACCGCCGGCCGTCTGCGCGCCGGATTGGAGCGCGCGGGCCTGAAGCAGGAGCGCCGCGCCCTGCGGCTGCGGCCAAGCGAACTGGAATGGGCATGGCGCGACGACGGCGCGCTGGAACTGCGCTTCGCGCTGCCGCCTGGCTGCTACGCGACCACGGTGCTGCGCGAGCTTGGCGACATTACGGACGCAGCGTTGCCCGCGTAG
PROTEIN sequence
Length: 345
VTAPARAHGAPVLAARIRSTPEDFFVEELPGFEPSGAGEHLLLTIEKRGMNTAFAAKTIAQWAGVDESAIGYAGLKDRHAVTRQRFSVWIPKKIAPDLAALQSDALRVLDHAWHARKLPRGALAGNRFVLVLRELEGQREAVDARLSAIARRGVPNHFGEQRFGRGGDNVRKAVAMFAGGRVKREERTMLLSAARSELFNRVLAARVEAGNWDAALDGEVWMLDGSRSVFGPEAMSPDLQARLAAFDIHPTGPLWGEGELRSADVAREVELAAVQGDTAGRLRAGLERAGLKQERRALRLRPSELEWAWRDDGALELRFALPPGCYATTVLRELGDITDAALPA*