ggKbase home page

cn_combo_scaffold_9442_17

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(12778..13533)

Top 3 Functional Annotations

Value Algorithm Source
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 277.0
  • Bit_score: 392
  • Evalue 4.10e-106
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Dyella ginsengisoli RepID=UPI00034D4E06 similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 276.0
  • Bit_score: 394
  • Evalue 5.80e-107
2-dehydro-3-deoxyphosphooctonate aldolase similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 277.0
  • Bit_score: 386
  • Evalue 5.80e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGGATCTTTGCGGCTTCAAGGTCGGCCTCGACCAACCGCTGTTCTTGATTGCCGGCCCCTGCGTGGTCGAAAGCGAGCAGCTGCAGATCGACGTGGCGGGGCAGTTGAAGGAGATCACCGGCAAGCTGGGGATCAACTTCATCTTCAAGTCCAGCTTCGACAAGGCCAACCGCACCTCGATCAACAGCTTCCGCGGCCCCGGCATGGAAGAGGGCCTGCGCGTGTTGGCGGAAGTGAAGCGCCAGCTCGGCGTGCCGGTGCTGACCGACGTGCACGAATACACGCCCATGGACGAAGTGGCCGCGGTGGTGGACGTGCTGCAGACGCCGGCCTTCCTGGTGCGCCAGACCGACTTCATCACCAGGGTCGCCAAGTCCACCGGCAACCAGCAGATCATGGTCTGCGAGCGCGGCGCCAGCTTCGGCTACAACAACCTGGTCAGCGACATGCGCAGCCTCGCGGTGATGCGCGACACCGGCTGCCCGGTGGTGTTCGACGCCACCCACTCGGTGCAGCTGCCGGGCGGGCAGGGCGCAAGCTCCGGCGGCCAGCGCGAATTCGTGCCGGTGCTGGCGCGCGCAGCGGTCGCGGTGGGCGTGGCCGGCGTGTTCATGGAAACCCATCCCGACCCGAGCAAGGCGCTGTCCGATGGGCCCAACGCCTGGCCGCTGGGCAAGATGGAAGCGCTGCTGGAAACGCTGCTGGCGCTGGATTCGATCACCAAGAAACACGGGTTTCTGGAAAGTTCGGTCTGA
PROTEIN sequence
Length: 252
MDLCGFKVGLDQPLFLIAGPCVVESEQLQIDVAGQLKEITGKLGINFIFKSSFDKANRTSINSFRGPGMEEGLRVLAEVKRQLGVPVLTDVHEYTPMDEVAAVVDVLQTPAFLVRQTDFITRVAKSTGNQQIMVCERGASFGYNNLVSDMRSLAVMRDTGCPVVFDATHSVQLPGGQGASSGGQREFVPVLARAAVAVGVAGVFMETHPDPSKALSDGPNAWPLGKMEALLETLLALDSITKKHGFLESSV*