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cn_combo_scaffold_9490_4

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 1577..2170

Top 3 Functional Annotations

Value Algorithm Source
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter conc similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 197.0
  • Bit_score: 309
  • Evalue 4.60e-81
Putative marc transporter family transmembrane protein id=2598258 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 196.0
  • Bit_score: 303
  • Evalue 1.40e-79
membrane protein similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 195.0
  • Bit_score: 297
  • Evalue 3.70e-78

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Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGACCGTCGCCGCCGCTGCCCTGCTGCTGTTCTTCATCCTCGATCCGCTGGGCAACATCCCGGTGTTCCTGAGCGTGCTCAAGGACCTTTCACCCGCCCGCCAGCGCAAGGTGCTGGCGCGCGAGCTGCTGATCGCGCTGGCGGTGCTGATGCTGTTCCTGTGGGGCGGCCAGTACGCGCTGGAACTGATGCACCTGCGCCAGGAGTCGGTGTCCATCGCCGGCGGCATCGTGCTGTTCCTGATTGGCCTGCGCATGATCTTCCCGACCGCCGACGGCGTGATGGGGGACGTGCCGGGCGGGGAGCCCTTCATCGTCCCGCTGGCCATCCCGATGATCGCCGGCCCGTCCGGCATGGCCGCGGTGATGCTGCTGGGCAGCCAGGAGCCGGACCGGATGGGCGACTGGATGCTGGCGCTGGTGTTGGCCTGGGGGGCCACCGCAGCCATCCTGTTCTCCGCCACCTGGCTGAAGAAGCTGCTGGGGACGCGCGTGCTCACCGCCGTCGAGCGCCTGATGGGCATGGTGATCGTGGCGATTTCCGTGCAGATGCTGCTGGATGGCATCGCCTCCTACCTGCGCGTCGCCGCCTAA
PROTEIN sequence
Length: 198
MTVAAAALLLFFILDPLGNIPVFLSVLKDLSPARQRKVLARELLIALAVLMLFLWGGQYALELMHLRQESVSIAGGIVLFLIGLRMIFPTADGVMGDVPGGEPFIVPLAIPMIAGPSGMAAVMLLGSQEPDRMGDWMLALVLAWGATAAILFSATWLKKLLGTRVLTAVERLMGMVIVAISVQMLLDGIASYLRVAA*