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cn_combo_scaffold_9838_8

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(7743..9092)

Top 3 Functional Annotations

Value Algorithm Source
fimbrial protein n=2 Tax=Xanthomonadaceae RepID=UPI00036732CE similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 466.0
  • Bit_score: 563
  • Evalue 1.70e-157
Type IV pilus biogenesis protein PilQ {ECO:0000313|EMBL:KGQ20090.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 452.0
  • Bit_score: 590
  • Evalue 2.40e-165
type IV pilus secretin PilQ similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 466.0
  • Bit_score: 558
  • Evalue 1.50e-156

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ACGTTCAACTTCCAGGACGTGCCTGTGCGCACCGTCCTGCAGTTGATCGCCGACGAGTCCAACCTCAACATCGTCGCCGCCGACACCGTGCAGGGCAGCGTCACCCTGCGTCTTGTCAACGTGCCGTGGGACCAGGCGCTCGATCTGGTGCTGCAGTCCAAGTCGCTGGACAAGCGGCGCAGCGGCAACGTGGTGTGGGTGGCTCCGCAGAAGGAAATCGCCGATTTCGAACAGGCCAAGGAAGACGCCCGCATCAACCTGGAGGAACGCGCCGAGAAGGTGACCGAGTACATCCCGGTCAACTACGCCAATGCCGAGGACATCGCCCGCCTGCTGACCGAAGAAAGCAAGGGCAACCAGCAGGGTGGCGGTTCGCAGGGTGGCCAAAGCGCCCAGGACCGTGGCTTCCTGTCCGGCCGTGGCAGCATCAGCTTCGACAAGCGCACCAATACCCTGCTGGTGATCGACATCCCGCAGCGGGTGGCCAGCATCAAGGACCTGGTCCAGCAGCTCGACAAGCCGGTCGACCAGGTGGTGATCGAGGCCCGCATCGTGATCGCCAACGAGAACGTGGCGCGCGAGCTTGGGGCCAAGTTCGGCATCACCGGCACAAAGGACAACGTGCTTTACAGCAACAGCATCGCCAATAACATCGCGAACCAAAATGCGATCGTCAACGCCAACCAGCAGAACAGCGGTCCTAACCCGCCGACGCCGCCAGCCGTGCCGACAATCCAGCGAGGCTTGATGAGCAACCTGCCTGCCACCTTGACCGGTGCCAACGCAGGTTCGCTGGCGCTGTCTATCCTCAATGCGGGCTATGCGCTGGATATCGAGCTGTCAGCCATTCAGGCTCAGGGTCGTGGCGAAGTGATTTCCAACCCGCGCATCGTCACCAGCAACCAGAAGGAGGCGGTCATCCGGCAGGGCAAGGAGATCGGCTACCTCACCGTATCCGGTGGTCAGGGCGGCAACGTACCAACCGTGCAGTTCAAGGAGGCGCTGCTGGAGCTGAAGGTCACGCCAACCATCACTAACGACGGCCGCGTGTTCCTCAACATGGGCGTGAAGAAGGACGAGTTGGATCGATTCATCAGTCTCGGCTCCTTCGGCGAGGTGCCGCAGATCGCCAAGCGCGAAGTCAATACCGCGGTGCTGGTCGAAGACGGCCAGACGGTGGTGATCGGCGGCGTCTACGAGTTCAGCGATACCTCCGAGATTTCAAAGGTGCCGTTCCTGGGTGACATTCCGCTGCTCGGCAACCTGTTCCGCAACAAGAACCGGAGCAAGAGCAAGGCCGAGCTGCTGGTGTTCGTGACGCCGAAGGTCATGCGCGTCGCCCAGCACTGA
PROTEIN sequence
Length: 450
TFNFQDVPVRTVLQLIADESNLNIVAADTVQGSVTLRLVNVPWDQALDLVLQSKSLDKRRSGNVVWVAPQKEIADFEQAKEDARINLEERAEKVTEYIPVNYANAEDIARLLTEESKGNQQGGGSQGGQSAQDRGFLSGRGSISFDKRTNTLLVIDIPQRVASIKDLVQQLDKPVDQVVIEARIVIANENVARELGAKFGITGTKDNVLYSNSIANNIANQNAIVNANQQNSGPNPPTPPAVPTIQRGLMSNLPATLTGANAGSLALSILNAGYALDIELSAIQAQGRGEVISNPRIVTSNQKEAVIRQGKEIGYLTVSGGQGGNVPTVQFKEALLELKVTPTITNDGRVFLNMGVKKDELDRFISLGSFGEVPQIAKREVNTAVLVEDGQTVVIGGVYEFSDTSEISKVPFLGDIPLLGNLFRNKNRSKSKAELLVFVTPKVMRVAQH*