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cn_combo_scaffold_10000_2

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 129..1127

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:KIJ72376.1}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 332.0
  • Bit_score: 602
  • Evalue 4.50e-169
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 332.0
  • Bit_score: 594
  • Evalue 2.40e-167
DNA-directed RNA polymerase subunit alpha n=1 Tax=Xanthomonas RepID=UPI000262A558 similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 332.0
  • Bit_score: 594
  • Evalue 8.60e-167

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Taxonomy

Tolypothrix campylonemoides → Tolypothrix → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGACGGTTACCGCCACCCAAGTGCTGCGTCCGCGCGGACCGCAGATCGAGCGCATCACCGACAACCGCGCCAAGGTCGTGATCGAGCCGCTGGAGCGCGGTTACGGCCACACCTTGGGCAATGCGCTGCGTCGCGTGCTGCTGTCCTCGATCCCCGGCTTCGCGATCACCGAAGTTGAGATCGACGGCGTGCTGCACGAGTACACCACGGTCGAAGGCCTGCAGGAGGACGTGCTCGAGGTCCTGCTGAACCTAAAGGACGTCGCCATCCGCATGCACAGCGGCGACACCGACACCCTGGAGCTGAAGAAGCAGGGTCCGGGCGTCGTCACCGCCGGCGACATCAAGACCAGCCACAACGTCGAGGTGCTCAACCCCGACCACGTGATCGCCAACCTGACCAAGGACGTGGCGCTGAACATGCGCCTCACCATCAGCCGCGGTTTCGGCTACCAGCCGGCCTCCGCGCGCCGCCGCCCGGACGAGGAGACCCGCACCATCGGTCGCCTCATGCTGGATGCTTCGTTCTCGCCGGTCCGGCGCGTCGCCTACGCGGTGGAAGCCGCGCGCGTCGAGCAGCGTACCGACCTCGACAAGCTGGTGATGGAGATCGAGACCAACGGCACCATCGATGCGGAAGAGGCGGTGCGTACCGCGGCCGACATCCTCACCGACCAGCTGTCGGTGTTCGGCGATTTCACCCATCGCGACCGCGGCGCCAAGCCGCAGGCCAGCACCGGCGTCGATCCGCTGCTGCTGCGCCCGATCGACGACTTGGAGCTGACGGTGCGTTCGGCCAACTGCCTCAAGGCCGAGAGCATCTACTACATCGGCGACCTGATCCAGAAGACCGAAGTGGAGCTGCTCAAGACCCCGAACCTGGGCAAAAAGTCGCTCACCGAGATCAAGGAAGTGCTGGCCCAGAAGGGCCTGTCGCTCGGCATGAAGCTGGAGAACTGGCCGCCGGCCGGCGTCGCCAGCCACGGCATGATGGGGTGA
PROTEIN sequence
Length: 333
MTVTATQVLRPRGPQIERITDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVEIDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRMHSGDTDTLELKKQGPGVVTAGDIKTSHNVEVLNPDHVIANLTKDVALNMRLTISRGFGYQPASARRRPDEETRTIGRLMLDASFSPVRRVAYAVEAARVEQRTDLDKLVMEIETNGTIDAEEAVRTAADILTDQLSVFGDFTHRDRGAKPQASTGVDPLLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLTEIKEVLAQKGLSLGMKLENWPPAGVASHGMMG*