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cn_combo_scaffold_10944_3

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 1154..2905

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 580.0
  • Bit_score: 837
  • Evalue 8.50e-240
ATP-binding protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B153 similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 576.0
  • Bit_score: 795
  • Evalue 4.50e-227
lipid A ABC exporter similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 575.0
  • Bit_score: 794
  • Evalue 1.70e-227

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Taxonomy

Lysobacter arseniciresistens → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1752
ATGAGCGATGCCGTCTCCCCCTGGGCGATCTACCGACGCCTGCGCGGCCTGGCCGCGCCGTACCGCGGGGTGCTGCTGGTGGCGTTGTTCGGGTTGGCGCTGGAGGGCGTTGCCGCCGGCGCGTTCGGCCTGCTGACCAAACCCATGGTCGACGAGACGTTCGTCGCCCGCAACCAGGACTACGGGCTGCTGTTGCCGCTGGCCATCATCGGCATCTTCGTGGTGCGCGGCGTGGCCGGCTATGCCACCGACCTGTACATGGCCAAGGCCGCGCGTGGCATCGCCCGCGACATGCGGGTGAACGCGCTGGACAAGTACCTGCGGCTTCCGGGCCTGCGCTTCGACGCCGAGCCGGTGCCGTCGATGCTGGTTCGGCTGGGTTCGGACAGTGACCAGGTCGCGCAGGCGGTGGTGGATTCGGCCAAAGTCATGCTGCAGCAGTCGCTGCAGGTGGTGGCGATGCTGGCGGTCATGCTGTACGCCAGCTGGCGGGTGACGCTGGCGGTGCTGCTGCTGGGTCCGCTGATCGCGTGGATGATGGACAAGGTAGGCAGGCGCTACCGCCGCATTGGCCACCGGGTACAGGAAACCTCGGCCGAAATGATGCTGGCCGCCGACCAGGCGCTGTCCAACCAGCAGGAGGTCAAGGTCTACGGTGCCCGCGCCGCCGAACTGGAGCGTTACACCGGGCTTGCCAACCACAACCTAGGCCTGAGCCTGAAGGTCGAGGCCACCCGCAGCATTTCCTCGGCGGTGGTGCAGCTCACCGGCGCAGTGGGCCTGGCCGTGCTGCTGTTCTTCGCCGGCCGCGAGGCGCTGGAAGGGCGGCTGACCGCCGGCGGTTTCGTGCAGCTGATGATCGCGATGCTGGCGATCATCCCCGCGCTGAAGCAGCTCACCAACGTGCAGGGCATGCTCCAGCGCGGCGTCGCTTCCGCCGAACGCCTGTTCTCGGTGCTGGATGCCGACGACGAGATCGACGCCGGCGCGCGTCCGCTGGCGCGCGCGCGCGGGCTGATCGAGTTCCGCGACGTCCGCCTGGCCTATCCGGACCAGCCGCGCCCGGCGCTCGACGGCATCAGCTTCTCCGCCCGGCCCGGCACGGTCACCGCCATCGTCGGCCGCTCCGGCAGTGGCAAGTCCACGCTGGTGAAACTGATCCCGCGCTTCTACGAACCCGATGGCGGGCAGATCCTGCTCGATGGACACCCGCTTGCCGACTATCCGCTGGCCGACCTGCGCCGGCAGCTGGCGATGGTGGGGCAGCAGGTGATGCTGTTCGACGGCACCGTCGCCGCCAACGTCGCCTACGGGGAGCTGCGCGGCGCGGCCGACCATGACGTGGCGCGGGCACTGCGCGACGCCAACGCGATGGAATTCGTGGAGCGCCTGCCCGATGGCATGCAGGCGCAGATCGGGGTCAAGGGCGGAAAGCTGTCCGGCGGCCAGCGCCAGCGCCTGGCGATCGCCCGGGCGATGCTGAAGGACGCGCCGATCCTCATCCTCGACGAGGCCACCGCTGCGCTCGACAACGCCTCCGAGCGGCTGGTGCAGGAGGCACTGGCGCAGCTGATCCCGGATCGCACCACGCTGGTCATCGCCCACCGCCTGTCCACCGTCGAGCATGCGGACCAGATCCTGGTGCTGGACGAGGGCCGGCTGGTGGAGCAGGGCACCCATGCGGAGTTGCTGGCGCAGGGCGGCGTGTACGCGCAGCTGCATGCCGCGCAGTTCCGGGAGAACGGGGCTTGA
PROTEIN sequence
Length: 584
MSDAVSPWAIYRRLRGLAAPYRGVLLVALFGLALEGVAAGAFGLLTKPMVDETFVARNQDYGLLLPLAIIGIFVVRGVAGYATDLYMAKAARGIARDMRVNALDKYLRLPGLRFDAEPVPSMLVRLGSDSDQVAQAVVDSAKVMLQQSLQVVAMLAVMLYASWRVTLAVLLLGPLIAWMMDKVGRRYRRIGHRVQETSAEMMLAADQALSNQQEVKVYGARAAELERYTGLANHNLGLSLKVEATRSISSAVVQLTGAVGLAVLLFFAGREALEGRLTAGGFVQLMIAMLAIIPALKQLTNVQGMLQRGVASAERLFSVLDADDEIDAGARPLARARGLIEFRDVRLAYPDQPRPALDGISFSARPGTVTAIVGRSGSGKSTLVKLIPRFYEPDGGQILLDGHPLADYPLADLRRQLAMVGQQVMLFDGTVAANVAYGELRGAADHDVARALRDANAMEFVERLPDGMQAQIGVKGGKLSGGQRQRLAIARAMLKDAPILILDEATAALDNASERLVQEALAQLIPDRTTLVIAHRLSTVEHADQILVLDEGRLVEQGTHAELLAQGGVYAQLHAAQFRENGA*