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cn_combo_scaffold_11460_5

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(4055..4864)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSM9_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 269.0
  • Bit_score: 205
  • Evalue 9.20e-50
Fimbrial protein {ECO:0000313|EMBL:AKC85443.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 261.0
  • Bit_score: 217
  • Evalue 3.30e-53
type IV pilus biogenesis/stability protein PilW similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 269.0
  • Bit_score: 205
  • Evalue 2.60e-50

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGCGGCGTGAGTTAGCCGCTCTGGTGGTCCTTGGCAGCCTGTTGCTGGCCGGGTGCAGCCAGCTTGAACGCCTGACACTCATCCGTCCAAGCGCGCAGCATCGCGGTTACACCCAGATCGCGCCCCGCTACGACGTCAGCGGCAAGCACGGCCAGGACAGCGGCGATGCGGCCATGCTGTTGGCGTCGGCTTCGCTGCTGTACCAGCGCGGCGAGCTGGCGGACGCGGAGGCAATGGCCCGCAAGGCGCAGAAGCTGCAGCCGGGCTCCGGCGATGCCGGCACCCTGCTTGGACTGGTCGCCGATGCGCGTGGCGACACCGCGGCTGCCGGCAGGCATTTCCAGGCCGCAGCGGCGTCCGCGCCGGGCAACGGCGTCTATGCCAACAACTACGGCACCTGGTTGTGTGCCAACGGGCGCGCGGCGGAGTCGCTTGACTGGTTCGACCGCGCACTGGCGGATCCGGCCTATCCCACGCCGGTGCGTGCGCTGGCCAATGCCGGCGAATGCGCCCGCAAGGCGGGGCAGCCCGTGCGCGCCGAAGCCAGCTGGCGCGCAGCTCTGGCGCTGGATGCGGTCGATATGCAGGCGCTTGCGGGAATGGCATCCCTGGCATTCACGCAGGGCGATTACCTCGAAGCGCGAGCTTTCGTCGAGCGCTGGCTGGCGGTGGCGCCGGACGATGTGGCTGCGTTGCAACTTGCGATGCAGGTCGAAGAAAAAACAGGCGACAACGTGGCCGCTTCGCGTTATCGTTCACGTTTGCAGGCGATTTCTCCGGGTCCTACCACGGCACCGCGCACGCAATGA
PROTEIN sequence
Length: 270
MRRELAALVVLGSLLLAGCSQLERLTLIRPSAQHRGYTQIAPRYDVSGKHGQDSGDAAMLLASASLLYQRGELADAEAMARKAQKLQPGSGDAGTLLGLVADARGDTAAAGRHFQAAAASAPGNGVYANNYGTWLCANGRAAESLDWFDRALADPAYPTPVRALANAGECARKAGQPVRAEASWRAALALDAVDMQALAGMASLAFTQGDYLEARAFVERWLAVAPDDVAALQLAMQVEEKTGDNVAASRYRSRLQAISPGPTTAPRTQ*