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cn_combo_scaffold_11616_4

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 2253..2771

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037F0E7F similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 173.0
  • Bit_score: 286
  • Evalue 2.00e-74
RNA polymerase sigma 70 similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 166.0
  • Bit_score: 281
  • Evalue 1.80e-73
RNA polymerase sigma 70 {ECO:0000313|EMBL:AJC47716.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchar similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 166.0
  • Bit_score: 281
  • Evalue 9.00e-73

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGATACCATCGCCCGCATGACCACCGACGATGCCCGCGCCGCCTTCGGCACGCTGCTGCAGCGCCACGCCGGGATCGTGTTCAAGATCGCCGGCGGCTACGCGCGCGGCGCCGAGGACCGCGCCGATCTTGCGCAGGAAATCGCCGCGCAGCTCTGGCACGCCTGGCCGAAATACGACCCCGCGCGCAGCGCCAGCACCTGGATGTACCGGATCGCGCTGAACGTGGCGATCAGCCACCTGCGCCAGCAGGAACTGCGACGCCGGCACGATGCCGTGCCGCTGGACGATGCCCTGCACGACGTGGCGGATGCGAATGCCCTCGATCCGGAACAGGCGCAGCACCTGCGCCTGCTGCAGGCTTTCATCGCCCGCCAGCCGCCGCTGGAGCGCGCCCTGCTGCTGCTCTACCTCGACGACCGCCCGCAGCGCGAGATCGCCGAGATCCTCGGCATCAGCGAAAGCAATGTCTCCACCAAGATCGGGCGGCTGAAACAGCGCATCCGCGACGCTTTCTGA
PROTEIN sequence
Length: 173
MDTIARMTTDDARAAFGTLLQRHAGIVFKIAGGYARGAEDRADLAQEIAAQLWHAWPKYDPARSASTWMYRIALNVAISHLRQQELRRRHDAVPLDDALHDVADANALDPEQAQHLRLLQAFIARQPPLERALLLLYLDDRPQREIAEILGISESNVSTKIGRLKQRIRDAF*